Gene GM21_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0003 
Symbol 
ID8135302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2949 
End bp4043 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content59% 
IMG OID644867620 
ProductDNA replication and repair protein RecF 
Protein accessionYP_003019848 
Protein GI253698659 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTA TTAAGCTCAA ACTTGCTTCC TTTCGCAACC TGCAAAACAT AGAACTTGCG 
CCAGGCAAGA AGTTCAACGT TTTCTACGGT AATAACGGCC AGGGCAAGAC CAACCTGCTG
GAGTCGATCT ACCTCCTAGC TACCATGAAG TCGTTCAAGC AGGCGCGAAA CGCGGAGCTG
ATCGCGTTCG GGGGCGAGTT TGCGCTGGTG AAAGGGACCG TGGAGCGGGA TCAGGTCCGG
CGGGAAATAG CGGTTCTCAT CGAGAAGCAG GGGAAAAAGG CGAAGGTCGA CGCCAAGTTG
ATGACCAGGC TGGACGACTT CTTCGGCAAC CTGAACGTGG TGCTCTTCAC CCCGGAAGAG
ATCTCCATGG TGCGCGGGGG GCCGGATCTT CGGCGCAGGT ACCTGGACCG GGCGGTTTTC
ACCTGCGACC TCGGCTACCT GACCGCCTAC CACGATTACG CGAAGATCCT GAAGAACCGC
AACGCCCTCC TCAAGGTGAA CGAGACCGCG GGGATCGAGG TCTGGACCGA GCAACTGGTA
CAGGCGGCGC TTTTGGTGAT AGAGCGGAGA AAGGCGTACC TGGACCGGAT AGGGAGACTG
CTGCAGGGGT TCTACAGCGA GATATCCGGC AACGACGAGA CGGTTCAGAT CGAATACCGG
CTGCATGGGG TGGACGCTCG GCTTTTCGCC GAGGATCCGG CCGAGGCCCT CAACCAGGCG
CTCAGGGCGC ATGCGGCGGA GGAGAGAAGA CGCGGCTCCA CGGCCATAGG CCCCCACCGC
GACGACCTTT ACTTCGGCCT CAACGGCCGC GGCGCCAGGC AGTTCGCCTC CCAGGGACAG
CAGCGCTCCT TCGTGCTGGC GCTCAAGATG GCGGAGATAG AACATATCAC CAGGTGCTTC
GAGGCGCCGC CGGTGCTCCT GCTGGACGAC ATGACCAGCG AGCTGGACCG GGAGCGCAAC
CGCAACCTGA TGGAGTTTTT GAAGAAGCGG GAGATGCAGG TATTCATCAC CACTACGTCG
CTCCATAACG TGGATGTCGA TGAGCTGCAG GACAACAGGA CGTTTCGCAT CAAAGAGGGA
AAAATTCTCG ACTAG
 
Protein sequence
MKLIKLKLAS FRNLQNIELA PGKKFNVFYG NNGQGKTNLL ESIYLLATMK SFKQARNAEL 
IAFGGEFALV KGTVERDQVR REIAVLIEKQ GKKAKVDAKL MTRLDDFFGN LNVVLFTPEE
ISMVRGGPDL RRRYLDRAVF TCDLGYLTAY HDYAKILKNR NALLKVNETA GIEVWTEQLV
QAALLVIERR KAYLDRIGRL LQGFYSEISG NDETVQIEYR LHGVDARLFA EDPAEALNQA
LRAHAAEERR RGSTAIGPHR DDLYFGLNGR GARQFASQGQ QRSFVLALKM AEIEHITRCF
EAPPVLLLDD MTSELDRERN RNLMEFLKKR EMQVFITTTS LHNVDVDELQ DNRTFRIKEG
KILD