Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_R0098 |
Symbol | |
ID | 8135037 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4567103 |
End bp | 4568632 |
Gene Length | 1530 bp |
Protein Length | |
Translation table | |
GC content | 54% |
IMG OID | 644867357 |
Product | 16S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0530086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGAGTTTGAT CATGGCTCAG ATTGAACGCT GGCGGCAGGC CTAACACATG CAAGTCGAGC GGTAGCACAG AAGAGCTTGC TCTTCGGGTG ACGAGCGGCG GACGGGTGAG TAATGTCTGG GAAACTGCCT GATGGAGGGG GATAACTACT GGAAACGGTA GCTAATACCG CATAACGTCT TCGGACCAAA GAGGGGGACC TTCGGGCCTC TTGCCATCAG ATGTGCCCAG ATGGGATTAG CTAGTAGGTG AGGTAATGGC TCACCTAGGC GACGATCCCT AGCTGGTCTG AGAGGATGAC CAGCCACACT GGAACTGAGA CACGGTCCAG ACTCCTACGG GAGGCAGCAG TGGGGAATAT TGCACAATGG GCGCAAGCCT GATGCAGCCA TGCCGCGTGT GTGAAGAAGG CCTTCGGGTT GTAAAGCACT TTCAGCGGGG AGGAAGGCGG TGAGATTAAT ACTCTCACCG ATTGACGTTA CCCGCAGAAG AAGCACCGGC TAACTCCGTG CCAGCAGCCG CGGTAATACG GAGGGTGCAA GCGTTAATCG GAATGACTGG GCGTAAAGCG CACGCAGGCG GTTTGTTAAG TCAGATGTGA AATCCCCGAG CTTAACTTGG GAACTGCATT TGAAACTGGC AAGCTAGAGT CTTGTAGAGG GGGGTAGAAT TCCAGGTGTA GCGGTGAAAT GCGTAGAGAT CTGGAGGAAT ACCGGTGGCG AAGGCGGCCC CCTGGACAAA GACTGACGCT CAGGTGCGAA AGCGTGGGGA GCAAACAGGA TTAGATACCC TGGTAGTCCA CGCTGTAAAC GATGTCGATT TGGAGGTTGT GCCCTTGAGG CGTGGCTTCC GGAGCTAACG CGTTAAATCG ACCGCCTGGG GAGTACGGCC GCAAGGTTAA AACTCAAATG AATTGACGGG GGCCCGCACA AGCGGTGGAG CATGTGGTTT AATTCGATGC AACGCGAAGA ACCTTACCTA CTCTTGACAT CCACAGAATT CGGTAGAGAT ACCTTAGTGC CTTCGGGAAC TGTGAGACAG GTGCTGCATG GCTGTCGTCA GCTCGTGTTG TGAAATGTTG GGTTAAGTCC CGCAACGAGC GCAACCCTTA TCCTTTGTTG CCAGCGGTTC GGCCGGGAAC TCAAAGGAGA CTGCCAGTGA TAAACTGGAG GAAGGTGGGG ATGACGTCAA GTCATCATGG CCCTTACGAG TAGGGCTACA CACGTGCTAC AATGGCGTAT ACAAAGAGAA GCGACCTCGC GAGAGCAAGC GGACCTCATA AAGTACGTCG TAGTCCGGAT TGGAGTCTGC AACTCGACTC CATGAAGTCG GAATCGCTAG TAATCGTAGA TCAGAATGCT ACGGTGAATA CGTTCCCGGG CCTTGTACAC ACCGCCCGTC ACACCATGGG AGTGGGTTGC AAAAGAAGTA GGTAGCTTAA CCTTCGGGAG GGCGCTTACC ACTTTGTGAT TCATGACTGG GGTGAAGTCG TAACAAGGTA ACCGTAGGGG AACCTGCGGT TGGATCACCT
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Protein sequence | |
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