Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4277 |
Symbol | |
ID | 8135280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4839944 |
End bp | 4840465 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644867599 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Protein accession | YP_003019827 |
Protein GI | 253690637 |
COG category | [C] Energy production and conversion |
COG ID | [COG1142] Fe-S-cluster-containing hydrogenase components 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAAT TTGTTATTGC CGAAGCAGAA AAGTGTATCG GCTGCCGGAC CTGTGAAATC GCCTGTGCGG TCGCCCATAG CGGAGGCCAA AGCGCACAGC TGCGGCCTTC TCACTTCTTT CCGCGCCTAA AAGTCGTTAA AAGCGCCAGC GTCAGCGTAC CCGTTCTGTG CCGACAGTGT GAAAATGCGC CCTGCGCCAG CGTGTGTCCA AATGACGCGC TGGTGCGCGA TCGGGACAGC ATTCAGGTGA TTCAGTCTCG CTGCATCGGC TGCAAAAGCT GTGTGGTCGC CTGTCCTTTC GGCGCCATTA ATGTGGTGAC AAAAGCGTCG AATGACGAAG GGGAAACGCA CCTCACGCAA AGCGAGGTTC ACAAATGTGA TTTGTGCGCG GATGTCGCCC AGAGTCCCTC CTGCGTCAGC GTGTGTCCGA CATCGGCGCT GCGATTAGTG ACGGCGGATG AGTTGCGCAA GCAGACACTG GAAAAACAGC GGCGTTCCGC ACTGGGGTGG CCGAGCCATT AA
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Protein sequence | MNQFVIAEAE KCIGCRTCEI ACAVAHSGGQ SAQLRPSHFF PRLKVVKSAS VSVPVLCRQC ENAPCASVCP NDALVRDRDS IQVIQSRCIG CKSCVVACPF GAINVVTKAS NDEGETHLTQ SEVHKCDLCA DVAQSPSCVS VCPTSALRLV TADELRKQTL EKQRRSALGW PSH
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