Gene PC1_4277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4277 
Symbol 
ID8135280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4839944 
End bp4840465 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content57% 
IMG OID644867599 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003019827 
Protein GI253690637 
COG category[C] Energy production and conversion 
COG ID[COG1142] Fe-S-cluster-containing hydrogenase components 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAT TTGTTATTGC CGAAGCAGAA AAGTGTATCG GCTGCCGGAC CTGTGAAATC 
GCCTGTGCGG TCGCCCATAG CGGAGGCCAA AGCGCACAGC TGCGGCCTTC TCACTTCTTT
CCGCGCCTAA AAGTCGTTAA AAGCGCCAGC GTCAGCGTAC CCGTTCTGTG CCGACAGTGT
GAAAATGCGC CCTGCGCCAG CGTGTGTCCA AATGACGCGC TGGTGCGCGA TCGGGACAGC
ATTCAGGTGA TTCAGTCTCG CTGCATCGGC TGCAAAAGCT GTGTGGTCGC CTGTCCTTTC
GGCGCCATTA ATGTGGTGAC AAAAGCGTCG AATGACGAAG GGGAAACGCA CCTCACGCAA
AGCGAGGTTC ACAAATGTGA TTTGTGCGCG GATGTCGCCC AGAGTCCCTC CTGCGTCAGC
GTGTGTCCGA CATCGGCGCT GCGATTAGTG ACGGCGGATG AGTTGCGCAA GCAGACACTG
GAAAAACAGC GGCGTTCCGC ACTGGGGTGG CCGAGCCATT AA
 
Protein sequence
MNQFVIAEAE KCIGCRTCEI ACAVAHSGGQ SAQLRPSHFF PRLKVVKSAS VSVPVLCRQC 
ENAPCASVCP NDALVRDRDS IQVIQSRCIG CKSCVVACPF GAINVVTKAS NDEGETHLTQ
SEVHKCDLCA DVAQSPSCVS VCPTSALRLV TADELRKQTL EKQRRSALGW PSH