Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4258 |
Symbol | atpC |
ID | 8135261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4817640 |
End bp | 4818059 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644867580 |
Product | F0F1 ATP synthase subunit epsilon |
Protein accession | YP_003019808 |
Protein GI | 253690618 |
COG category | [C] Energy production and conversion |
COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATGA CTTACCATCT GGATGTCGTG AGTGCAGAAC AGCAAATGTT CTCCGGTCTG GTGCAGAAGA TCCAGGTAAC GGGGAGCGAA GGCGAACTGG GTATTTATCC GGGACATGCC CCTCTGCTTA CTGCCATTAA ACCTGGTATG GTTCGTATCG TTAAGCAGCA CGGTGAGGAA GAGTATATTT ATCTTTCTGG CGGCATCCTT GAGGTGCAGC CGAATACCGT TACCGTACTG TCTGATACCG CAATCCGTGG GCAGGATCTG GATGAAGCTC GTGCGCTGGA AGCGAAACGT AAAGCTGAAG ATCATATCCG TAATTCGCAT GGTGATGTGG ATTATGCTCA GGCTTCAGCA GAGCTGAGCA AAGCGATTGC GAAGCTGCGC GTTATCGAGC TGACCAGAAA AGCGATGTAA
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Protein sequence | MAMTYHLDVV SAEQQMFSGL VQKIQVTGSE GELGIYPGHA PLLTAIKPGM VRIVKQHGEE EYIYLSGGIL EVQPNTVTVL SDTAIRGQDL DEARALEAKR KAEDHIRNSH GDVDYAQASA ELSKAIAKLR VIELTRKAM
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