Gene PC1_4235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4235 
Symbol 
ID8135238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4793168 
End bp4794055 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content52% 
IMG OID644867557 
ProductD-ribose transporter subunit RbsB 
Protein accessionYP_003019785 
Protein GI253690595 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000930744 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATGA AAAAGCTGGC TACTCTGGTT TCCGCTGTTG CGCTGAGCGC GACTGTCAGT 
GCTAATGCCT TGGCCAAAGA TACGGTTGCT CTGGTGGTTT CTACGCTGAA TAACCCGTTC
TTTGTTTCAA TGAAAGAGGG TGCGCAGAAA GAAGCTGACA AACTGGGTTA CGAGCTGATC
GTGCTGGATT CCCAGAATAA CCCAGCGAAA GAACTGGCTA ACGTTCAGGA TTTGACGGTA
CGTGGAACCA AAGTTCTGCT GATCAACCCG ACCGATTCTG ATGCGGTCGG TAATGCGATT
AAAATGGCAA ACCAGGCCAA GATCCCTGTT ATTACGCTGG ACCGCGTTGC CAGCAGTGGT
GAAGTGGTAA GCCACGTTGC TTCTGATAAC GCCTTCGGTG GTAAAGTTGC TGGTGACTTC
ATTGCCAAGA AACTGGGTGA AGGCGCTAAA GTTATTCAAC TGGAAGGGAT TGCCGGAACG
TCTGCCGCGC GCGAACGCGG TGCGGGCTTC ATGAAATCTG CTGAGAAAAA TAAATTCGTT
ATGTTGGCCA GCCAACCGGC TGACTTCGAT CGTACTAAAG GGCTGAACGT GATGCAGAAC
CTGCTGACCG CGCACCCTGA CGTTCAGGCG GTATTTGCTC AGAACGATGA AATGGCGTTG
GGCGCACTGC GTGCGCTGCA AACTGCAGGC AAGACTGATG TGCTGGTCGT CGGTTTTGAC
GGTACGCAGG ATGGCGTGAA GGCTGTTGAA TCAGGCAAGC TGGCGGCAAC GGTTGCTCAG
CGTCCCGATC AGATCGGTGT GATCGGCATC GAGACGGCGG CGAAGGTGCT GAAAGGCGAA
AAAACGCAGG CCATCATTCC GGTTGACCTG AAGCTGGTAG CAAAATAA
 
Protein sequence
MNMKKLATLV SAVALSATVS ANALAKDTVA LVVSTLNNPF FVSMKEGAQK EADKLGYELI 
VLDSQNNPAK ELANVQDLTV RGTKVLLINP TDSDAVGNAI KMANQAKIPV ITLDRVASSG
EVVSHVASDN AFGGKVAGDF IAKKLGEGAK VIQLEGIAGT SAARERGAGF MKSAEKNKFV
MLASQPADFD RTKGLNVMQN LLTAHPDVQA VFAQNDEMAL GALRALQTAG KTDVLVVGFD
GTQDGVKAVE SGKLAATVAQ RPDQIGVIGI ETAAKVLKGE KTQAIIPVDL KLVAK