Gene PC1_4226 details

Gene Information

• Locus tag: PC1_4226
• Symbol: engB
• ID: 8135225
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 4777881
• End bp: 4778516
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644867544
• Product: ribosome biogenesis GTP-binding protein YsxC
• Protein accession: YP_003019776
• Protein GI: 253690586
• COG category: [R] General function prediction only
• COG ID: [COG0218] Predicted GTPase
• TIGRFAM ID: [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.10318
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCCAGC AATATAACTA CCACATGACG CGTTTTATCA TCAGCGCCCC GGATATTCGC 
CATCTGGCAA CAGATAGCGG TATTGAAGTG GCCTTTGCTG GGCGCTCTAA CGCCGGAAAA 
TCCAGCGCGC TGAACACGCT GACCAACCAG AAGAACCTGG CTCGAACCAG TAAAACACCG 
GGCCGTACCC AGTTGATCAA CCTGTTCGAG GTGACCGACG GCGTGCGTTT GGTCGATCTC 
CCCGGCTATG GCTATGCCGA AGTGCCGGAG CAAATGAAGA TCAAATGGCA ACGTGCGCTC 
GGTGAATACC TGCAAAAGCG CAACAGCCTG AAAGGTCTGG TTGTGCTAAT GGATATTCGT 
CATCCGCTAA AAGATCTCGA TCAGCAAATG ATTCAGTGGG CAGTCGATGT CGAACTTCCA 
GTTTTAGTGC TGCTGACCAA AGCCGATAAG CTGGCTTCAG GTGCACGTAA GGCACAGTTG 
AATATGGTTC GCGAGGCTGT CTTGCCATTT ATGGGTGATA TTCAGGTCGA AGCGTTTTCA 
TCACTGAAAA AACTCGGTGT CGATAAACTA CGACAGAAGT TAGACAACTG GTTCAGCACG 
TTGGAACACG CTGAAGAAGA GCAAGAAGCA GAATAA 

 

Protein sequence

MTQQYNYHMT RFIISAPDIR HLATDSGIEV AFAGRSNAGK SSALNTLTNQ KNLARTSKTP 
GRTQLINLFE VTDGVRLVDL PGYGYAEVPE QMKIKWQRAL GEYLQKRNSL KGLVVLMDIR 
HPLKDLDQQM IQWAVDVELP VLVLLTKADK LASGARKAQL NMVREAVLPF MGDIQVEAFS 
SLKKLGVDKL RQKLDNWFST LEHAEEEQEA E