| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4225 |
|---|
| Symbol | |
|---|
| ID | 8135224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 4777123 |
|---|
| End bp | 4777677 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644867543 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003019775 |
|---|
| Protein GI | 253690585 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3078] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0915733 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGAC CTGTCAAAGG GGCTGCCGAT AAGGCAGGAA AACCCAAAGT AAAAAGAAAG
ACTCGTGAAG AGTTAGAGCG TGAAGCGCGT GAGCGGAAGA AAGATAAAAA GCATCGTGGT
CACGTGGCGG GAAGCCGAAC TCAGGAAAAA GCGTCTACCG ATCAGCGTTC TGGTCAGCGT
AAAGCCGCCG ATCCGCGTAT TGGTAGTAAA AAGCCTGTAC CGCTTGGCGT GTTAGATAGC
GCCGTTGCGA AACCTAAGCC TAAGTCGAAG CCTTCTGCGC CTGTGGAGAA CGTCGTTGCT
GCCAAACCGA CAATGTCTCC GGAAGAAGAG CTGGAAATGT TAGAAAACGA TTCACGTCTG
GATGCCTTGT TGGATCGTCT GGATAGCGGT GAAACGCTGA GCGCCAAAGA TCAATCATGG
GTTGATGAAA CGCTGGATCG TATCGATATC CTGATGGAAG AGCTTGGCAT TGAGCTAGGT
GATGATGACG AAGAAGAGCC GCAGGAAGAT ATGTTGCAGC TTTTGAAACG TAATAACCCG
AAAGACGCGT TCTAA
|
|---|
| Protein sequence | MNRPVKGAAD KAGKPKVKRK TREELEREAR ERKKDKKHRG HVAGSRTQEK ASTDQRSGQR
KAADPRIGSK KPVPLGVLDS AVAKPKPKSK PSAPVENVVA AKPTMSPEEE LEMLENDSRL
DALLDRLDSG ETLSAKDQSW VDETLDRIDI LMEELGIELG DDDEEEPQED MLQLLKRNNP
KDAF
|
|---|
| |