Gene PC1_4222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4222 
SymbolglnG 
ID8135221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4773692 
End bp4775104 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content56% 
IMG OID644867540 
Productnitrogen regulation protein NR(I) 
Protein accessionYP_003019772 
Protein GI253690582 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR01818] nitrogen regulation protein NR(I) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.327829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGAG GGATAGTCTG GATTGTCGAT GACGATAGCT CCATCCGTTG GGTGCTTGAG 
CGCGCGCTTG CTGGTGCGGG TTTAACCTGC GCAACGTTTG AGAACGGAAA TCAGGTATTG
CATGCGCTAG CAACACAAAC GCCCGACGTT CTGCTGTCCG ACATCCGCAT GCCAGGGATG
GATGGATTAG CGCTCTTACA GCAAATCAAA CAGCGCCACC CGATGCTTCC GGTCATCATT
ATGACGGCGC ATTCAGATTT GGATGCCGCC GTCAGTGCTT ATCAACAGGG TGCGTTCGAC
TATTTGCCGA AACCGTTCGA TATTGATGAA GCCGTTGCGC TGGTTGAGCG CGCGATCAGC
CATTATCTGG AACAGCAGCA GCCGGTACGC AGCCAACCGC TCAATGGCCC GACAACGGAT
ATTATCGGCG AAGCGCCCGC GATGCAGGAT GTCTTTCGCA TCATCGGCCG CCTGTCTCGC
TCGTCAATCA GCGTGCTGAT TAACGGCGAA TCGGGAACCG GTAAAGAGCT GGTGGCACAC
GCCCTGCATC GCCACAGCCC GCGTACCAAA GCCCCTTTTA TCGCGCTGAA TATGGCCGCC
ATACCCAAAG ATCTGATCGA ATCAGAACTG TTCGGCCATG AAAAAGGCGC ATTTACGGGC
GCCAACCAAA TTCGTCAGGG CCGCTTTGAG CAGGCCGATG GCGGGACGTT GTTTCTGGAT
GAAATCGGCG ACATGCCGCT AGACGTGCAA ACACGTCTGT TGCGCGTATT GGCAGACGGA
CAGTTTTATC GCGTTGGTGG CTACGCGGCG GTGAAAGTGG ATGTCCGCAT TATCGCGGCA
ACGCACCAAA ATCTTGAACA GCGCGTGCAG GAAGGCAAGT TCCGCGAGGA TCTGTTTCAC
CGCCTGAACG TGATCCGGGT TCATCTACCA CCGCTGCGTG AACGTCGGGA AGATATCCCT
CGCCTGGCGC GTTATTTCTT GCAGGCCACG GCCAAAGAGC TGGGCGTCGA GCCGAAGAAT
CTGCATCCAG AAGCGGAAAC AGCGCTGACC CGTTTACCGT GGCCCGGCAA CGTGCGCCAA
TTGGAAAATA CCTGCCGCTG GTTGACGGTC ATGGCCGCCG GTCAGGAAGT ATTGATTCAG
GATCTACCGC CTGAACTGTT CGAGACCACA GCACCGGATT CCACCGTGCA TATTCTGCCG
GACAGTTGGG CTACGCTGTT AGCACAATGG GCCGATCGCG CGCTGCGTTC CGGTCATCAA
AACCTGCTGG CGGAAGCACA GCCAGAAATG GAAAGGACGT TGCTGACGAC AGCACTGCGA
CATACGCAGG GGCATAAACA GGAAGCGGCA AGATTGCTGG GATGGGGCAG AAATACCCTG
ACGCGTAAAT TAAAAGAGCT GGGAATGGAG TAG
 
Protein sequence
MQRGIVWIVD DDSSIRWVLE RALAGAGLTC ATFENGNQVL HALATQTPDV LLSDIRMPGM 
DGLALLQQIK QRHPMLPVII MTAHSDLDAA VSAYQQGAFD YLPKPFDIDE AVALVERAIS
HYLEQQQPVR SQPLNGPTTD IIGEAPAMQD VFRIIGRLSR SSISVLINGE SGTGKELVAH
ALHRHSPRTK APFIALNMAA IPKDLIESEL FGHEKGAFTG ANQIRQGRFE QADGGTLFLD
EIGDMPLDVQ TRLLRVLADG QFYRVGGYAA VKVDVRIIAA THQNLEQRVQ EGKFREDLFH
RLNVIRVHLP PLRERREDIP RLARYFLQAT AKELGVEPKN LHPEAETALT RLPWPGNVRQ
LENTCRWLTV MAAGQEVLIQ DLPPELFETT APDSTVHILP DSWATLLAQW ADRALRSGHQ
NLLAEAQPEM ERTLLTTALR HTQGHKQEAA RLLGWGRNTL TRKLKELGME