Gene PC1_4215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4215 
Symbol 
ID8135214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4764632 
End bp4766326 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content55% 
IMG OID644867533 
ProductAsmA family protein 
Protein accessionYP_003019765 
Protein GI253690575 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA TCGGGAAATT ATTGCTGACC CTACTGCTGC TAGCCTTTTT AGCGCTGGTA 
GTCGTATACG TATTACTGCA AACCAGTTGG GCGGCAGGCT GGGTAAGTAA TTGGGTAAAC
CAGAACACCG ACTACCAGTT GTCGCTGGGA AAAATCAATC ATGATTGGTC AACAGCCGAT
CACATCCAAC TAACCGATGT CAGTTTTGGT CAGAAAAACC AGCCGCCGAC GCTCACCGCC
AAGCAGGTTT CAGCCGGGTT TAGCGTGCGT CAACTTACCG AACCACGTCA TTTTGCCAGT
CTGGAGCTAG AAGGCGGTAC GTTAAACCTT TCTTCACAGG CCGCCACACT CCCTATCGAA
GCCGATGTGC TACAGCTGCG TACGATGGCA CTGCAGGCAA AGGACGGTGA TTGGCGCCTG
AATGGCCAGC AGATCAACGG CGGGATGACG CCGTGGCAAC CCGAGGCGGG CTATCTACTG
GGCAAGCAGG GGCAGTTCCA GCTCAGCGCC CGTTCACTCG AACTTAACGA TATTCCCGCC
AGCCAGGTCT TGGTTCAGGG CGAAATCAAC CATAACCAGC TGATTTTGAG CAATTTTGGT
GCAGATGTTG CTCAAGGGCA GCTAACGGGC AACGCCAGCC GCGCGGAAGA CGGCAGTTGG
CAGATCGGTA ATCTCCGACT CAGCAATGTC CGTTTGCAAA CACAGAGAAC GCCGGAAGCC
TTCTGGCAAC CCGTGACCGA ACTGCCTTCC GTTACGGTTA ACCGCTTTGA TCTGATTGAT
GCCCGTATTG AAGGACCGGG ATGGGCGTTT ATCGACCTGG ATGTTGCCCT GCAAAATGTC
ACGTTTAAGC AGAATGACTG GCAAAGCGAA GGGGGAACGC TGTCGTTCAA TGCGACCGAT
ATTGTGAACG GCAACATGCA CCTGATCGAC CCTATCGTGA ATCTGGATTT GTCACCGGCA
GGCGTTAACA TCAAACAGTT TTCCACACGC TGGGAAGGCG GTTTACTCCG AACCAACGGC
AACTGGCAAC GTAGTAATCG ACGCTTACAG CTGAACGAAT TTGTTGTCGC AGGGATGGAG
TACACACTCC CCGGCGACTG GCGTCAGCGG TGGCAAGCGA CGCTGCCATC ATGGCTGGCA
GAAGTGAACG TGCGAAAATT CACGGCCAAT CGCAACCTGC TGATCGATAT CAACCCGGAT
TTCCCGTTCC AGCTCACCGC GCTGGATGGC TACGGCAGTG ATTTGCTGTT AGCACGCGAC
CACCAGTGGG GAGTCTGGAC AGGATCGTTG AACCTTAATG CCAGCGACGC GACGTTCAAT
AAAGTCGATG TGCGCCGCCC TTCACTGGCG CTGGTAGCCA ACGATAACCA GATCGCCATT
AACGAACTCA GCGCATTTAC GCAAAATGGC ATGCTGGAGG CCAAGGCGAC CATCAGCCAG
CAACCGGCAC GTAATTTATC CCTGTCGCTG ACGGGGCGCG CCGTGCCGCT GGATGTTCTG
ACGCGCTGGG GATGGCCAGA ACCCGCAACC GCACCGACAG GCAACACGAA TCTGCAATTA
CAGTTGAATG GGCGGCTTGC CGCCGATACA CCGCTGAAGC CAACGCTAAA CGGTACGCTG
CAGGGTGTGG ATAGCAACGA TCGCCCAATC AGACAGCAAA TGCATCAGGG AACCGTGGCA
GAAACGCAAG AATGA
 
Protein sequence
MKFIGKLLLT LLLLAFLALV VVYVLLQTSW AAGWVSNWVN QNTDYQLSLG KINHDWSTAD 
HIQLTDVSFG QKNQPPTLTA KQVSAGFSVR QLTEPRHFAS LELEGGTLNL SSQAATLPIE
ADVLQLRTMA LQAKDGDWRL NGQQINGGMT PWQPEAGYLL GKQGQFQLSA RSLELNDIPA
SQVLVQGEIN HNQLILSNFG ADVAQGQLTG NASRAEDGSW QIGNLRLSNV RLQTQRTPEA
FWQPVTELPS VTVNRFDLID ARIEGPGWAF IDLDVALQNV TFKQNDWQSE GGTLSFNATD
IVNGNMHLID PIVNLDLSPA GVNIKQFSTR WEGGLLRTNG NWQRSNRRLQ LNEFVVAGME
YTLPGDWRQR WQATLPSWLA EVNVRKFTAN RNLLIDINPD FPFQLTALDG YGSDLLLARD
HQWGVWTGSL NLNASDATFN KVDVRRPSLA LVANDNQIAI NELSAFTQNG MLEAKATISQ
QPARNLSLSL TGRAVPLDVL TRWGWPEPAT APTGNTNLQL QLNGRLAADT PLKPTLNGTL
QGVDSNDRPI RQQMHQGTVA ETQE