Gene PC1_4212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4212 
Symbol 
ID8135211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4760146 
End bp4760838 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content56% 
IMG OID644867530 
ProducttRNA guanosine-2'-O-methyltransferase 
Protein accessionYP_003019762 
Protein GI253690572 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCTC AACGTTATGC ACGCATAAAA GAAATGCTCA ACTGCCGTCA GCCCGATCTG 
ACGATTTGCA TGGAGCAGGT GCATAAGCCC CACAACATTT CTGCCGTTAT CCGTACCGCA
GATGCCGTCG GCGTACATCA GGTCCATGCG ATTTGGCCCA CCAGCCGGAT GAAAACGCTG
GTTTCCTCCG CCGCAGGCAG CAATAGCTGG GTTCAGGTGA AAACTCATCG CAATATCGGT
GATGCAGTCG GCCATCTGAA AGCAGAAGGC ATGCAGGTTC TGGCGACCAA TTTGTCTGAA
CACGCGGTCG ATTTTCGGGA AATTGATTAC ACCCGCCCGA CCTGCATTCT GCTCGGACAA
GAAAAAACCG GGATTACTGC CGAAGCGCTC AAGCTGGCCG ATCGGGACAT CATTATTCCG
ATGACCGGCA TGGTGCAATC ACTGAATGTC TCCGTAGCCT CGGCGTTGAT CCTGTATGAA
GCGCAGCGTC AGCGCCAAAT CGCCGGCATG TACCAGCGTG AAGACAGCCC GCTGGATGAA
GAAGAGCAAC AGCGCCTGCT GTTTGAAGGG GGCTATCCGG TACTGGCACG CGTCGCGAAG
CGCAAAGGGC TCCCCCGTCC TTATATTGAC CATCAGGGTC AGATTGTAGC GGATACCCCG
TGGTGGGCCG CGATGCAATC GTCGGAGTGC TGA
 
Protein sequence
MTPQRYARIK EMLNCRQPDL TICMEQVHKP HNISAVIRTA DAVGVHQVHA IWPTSRMKTL 
VSSAAGSNSW VQVKTHRNIG DAVGHLKAEG MQVLATNLSE HAVDFREIDY TRPTCILLGQ
EKTGITAEAL KLADRDIIIP MTGMVQSLNV SVASALILYE AQRQRQIAGM YQREDSPLDE
EEQQRLLFEG GYPVLARVAK RKGLPRPYID HQGQIVADTP WWAAMQSSEC