Gene PC1_4196 details

Gene Information

• Locus tag: PC1_4196
• ID: 8135194
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 4737316
• End bp: 4739358
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 644867513
• Product: oligopeptidase A
• Protein accession: YP_003019746
• Protein GI: 253690556
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0339] Zn-dependent oligopeptidases

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAATC CATTACTGAC TTCATTTACC CTGCCCCCGT TCTCCAGCAT CAAAACGGAA 
GATATTGTCC CTGCGGTAAA ATCCGCACTG GATGAATGCC GCGAGACGGT AGAACGTGTG 
GTGGCGCAAG CGGGGCCGTT TACATGGGAT AATCTGTGTC AGCCGCTGGC GGACAGCGAC 
GATCGTCTTA GCCGCATTTT TTCCCCCATC AGTCATTTGA ACGCCGTGAA GAACAGCCCG 
GAGCTGCGCG GTGCTTATGA GCAATGTCTG CCGCTGCTGT CTGAACACAG CACCTGGGTC 
GGCCAACATG CCGGTCTCTA TCAGGCCTAT CGCAGCCTGC GCGACGGCGA TCACTACACC 
GCGCTGAGCG TAGCGCAGAA GAAATCCGTT GATAACGCGC TACGCGATTT TGAACTGTCC 
GGTATCGGCC TGTCGCCGGA AAAACAGAAA CGCTACGGCG AAATTTCCGC TCGCCTGTCC 
GAACTTGGCT CGCAGTACAG CAACAACGTG CTGGATGCCA CAATGGGCTG GAGCAAGCTG 
ATTACCGACG TCGCTGAACT GGATGGCATG CCGGAAAGCG CCCTGGCGGC AGCCAAAGCG 
CAGGCGGAAG CCAAAGAACA AGATGGCTGG CTGCTGACGC TGGATATCCC GAGCTACCTG 
CCGGTAATGA CCTACTGCAC CAATCAGGCG CTGCGTGAAG AGATGTACCG CGCCTTCGGT 
ACACGTGCCT CCGATCAGGG GCCGAACGCG GGTAAATGGG ACAACAGCGA GATCATGGCG 
GAGGAGTTGG CGCTGCGTCA CGAGCTGGCA CAGCTGCTGG GCTTCGATAG CTATGCGCAC 
AAGTCGCTGG CGACCAAAAT GGCGGAAAAC CCACAGCAGG TTCTCGACTT CCTGACCGAT 
CTGGCAAAGC GCGCCCGTCC ACAGGCGGAA GAAGAACTCG CGCAGCTGCG CACTTTCGCC 
AAAGAACACT ACGGTGTGGA GGAGTTGCAG GCCTGGGATA TCACCTATTA CAGCGAGCAG 
CAAAAGCAGC ACCTGTATTC CATCAGCGAT GAGCAGCTTC GCCCATACTT CCCGGAAAAC 
CGGGCGGTAA ACGGCCTGTT TGAAGTGGTT AAACGCATCT ACGGCATCAC CGCGAAAGAG 
CGTAAAGACG TCGATATCTG GCACCCGGAT GTTCGTTTCT TCGATCTGTT CGATGAAAGC 
GGTGAGCTGC GCGGCAGCTT CTACCTCGAT TTGTACGCTC GCGAGCACAA ACGCGGCGGA 
GCCTGGATGG ATGACTGCGC GGGTAAACTG CGTAAAGGCA ACGGCGAACT GCAAAAGCCG 
GTCGCCTATC TGGTGTGTAA CTTCAACCGT CCGGTCAACG GCAAACCAGC TCTGTTTACC 
CACGACGAAG TCACCACGCT GTTCCACGAA TTCGGCCACG GCCTGCACCA CATGCTGACC 
CAGATCGATA CCGCCGGTGT GGCGGGCATT AACGGCGTAC CGTGGGATGC GGTCGAACTG 
CCGAGCCAGT TCATGGAAAA CTGGTGCTGG GAACCGGAAG CGCTGGCCTT TATCTCCGGC 
CATAACGAAA CCGGCGAACC GCTGCCGCAG GAACTGCTGG ATAAAATGCT GGCGGCGAAG 
AACTATCAGG CCGCGCTGTT CATTCTGCGT CAGCTGGAGT TCGGCCTGTT CGATTTCCGT 
CTGCACGCCG AGTTTGACCC CGCGAAAGGC GCTCAGATTC TGCCAACACT GGCCGAAATC 
AAAGCACAGG TGGCCGTGGT GCCAAGCCCG AGCTGGGGCC GCTTCCCGCA TGCGTTCAGC 
CATATCTTCG CGGGCGGCTA TGCCGCAGGC TATTACAGCT ATCTGTGGGC CGACGTGTTG 
GCAGCCGATG CCTATTCCCG CTTCGAGGAA GAAGGGATCT TCAACCGTGA AACCGGCCAG 
TCGTTCCTGG ACAACATCCT GACCCGCGGC GGTTCCGAAG AGCCAATGGA GTTGTTCAAA 
CGCTTCCGTG GCCGCGAACC GCAGTTGGAC GCCATGCTCG CGCATTACGG CATCAAAGGA 
TGA 

 

Protein sequence

MTNPLLTSFT LPPFSSIKTE DIVPAVKSAL DECRETVERV VAQAGPFTWD NLCQPLADSD 
DRLSRIFSPI SHLNAVKNSP ELRGAYEQCL PLLSEHSTWV GQHAGLYQAY RSLRDGDHYT 
ALSVAQKKSV DNALRDFELS GIGLSPEKQK RYGEISARLS ELGSQYSNNV LDATMGWSKL 
ITDVAELDGM PESALAAAKA QAEAKEQDGW LLTLDIPSYL PVMTYCTNQA LREEMYRAFG 
TRASDQGPNA GKWDNSEIMA EELALRHELA QLLGFDSYAH KSLATKMAEN PQQVLDFLTD 
LAKRARPQAE EELAQLRTFA KEHYGVEELQ AWDITYYSEQ QKQHLYSISD EQLRPYFPEN 
RAVNGLFEVV KRIYGITAKE RKDVDIWHPD VRFFDLFDES GELRGSFYLD LYAREHKRGG 
AWMDDCAGKL RKGNGELQKP VAYLVCNFNR PVNGKPALFT HDEVTTLFHE FGHGLHHMLT 
QIDTAGVAGI NGVPWDAVEL PSQFMENWCW EPEALAFISG HNETGEPLPQ ELLDKMLAAK 
NYQAALFILR QLEFGLFDFR LHAEFDPAKG AQILPTLAEI KAQVAVVPSP SWGRFPHAFS 
HIFAGGYAAG YYSYLWADVL AADAYSRFEE EGIFNRETGQ SFLDNILTRG GSEEPMELFK 
RFRGREPQLD AMLAHYGIKG