Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4183 |
Symbol | |
ID | 8135181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4721710 |
End bp | 4722615 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644867500 |
Product | FAD-binding 9 siderophore-interacting domain protein |
Protein accession | YP_003019733 |
Protein GI | 253690543 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2375] Siderophore-interacting protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTAG CTAACCGCAC AACGTCTTCA GCCTATCGAT TGTTCAACTT ACGCCTCGAG AGTAAGACGT TGCTCTCGCC TTCATTAGCT CGCTGTGTGT TCACCGGCCC GGAAGTGCGC CAGATGAAAC TGGATGCGCC GGATCAGCGC ATTAAGCTGC TTTTCGCCAG TGAAAGCGGG GAGCTGACGC CGATGGCCGT GAGCGATACC TGGTATCAGG ATTATCTGGC GCTGCCGCGT GAGCGTCGCC CAATTTTACG TACTTATACG CTGCGTTCCG TCTCGCAGGA ATCACAGCAG GCAGCGATCG ATTTTGTGCT GCACGGCGAT ACCGGGCCTG CTTCAAGCTG GGCGAATCAT GCTAAGCCGG GCGATGCGCT ACAGATTGTG GCACCTAATG CGGAGGCTGA TGGCGACAGC GGCGGCTATG AATGGGCACC GCACGATGGC GTTGAGCAGG TGTTGCTGAT TGCGGATGAA ACGGCACTAC CTGCGGCAAT GGGGATTCTT GAACAGTTGG CGAGTCAGTC TTCTCCACCG TCGGTGCAGG CTTTTTTTGA AGTGCCGAAA GCGGCTGACT GCGTAACGTC GGGCGATTTC CCGTTTGCGC AGATTCACTG GCTGCCGCGT GAGGAAACCG GCAGTACAGT ATGGGGTGAA CGCCTGCTGG CAGCGGTGCA ACAGGACGTG AAAATCCCCG CCAGCGCCTG TACCAACCAC GATGAAATCG CGCAGGAGAC GCCGGAAGAC GAGCTGCTGT GGGAGCGAGC AACAGCGCAT CGCCCGTTTT ACGCTTGGGT GGCGGGAGAG TCTTCTGCTA TCAAACGGCT GCGTCGCTAT CTGCTCGACG AGCGCCACCT TGATAAAGAG ACGATCAACT TTATGGCGTA CTGGTCGCAT CGTTAA
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Protein sequence | MSLANRTTSS AYRLFNLRLE SKTLLSPSLA RCVFTGPEVR QMKLDAPDQR IKLLFASESG ELTPMAVSDT WYQDYLALPR ERRPILRTYT LRSVSQESQQ AAIDFVLHGD TGPASSWANH AKPGDALQIV APNAEADGDS GGYEWAPHDG VEQVLLIADE TALPAAMGIL EQLASQSSPP SVQAFFEVPK AADCVTSGDF PFAQIHWLPR EETGSTVWGE RLLAAVQQDV KIPASACTNH DEIAQETPED ELLWERATAH RPFYAWVAGE SSAIKRLRRY LLDERHLDKE TINFMAYWSH R
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