Gene PC1_4180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4180 
Symbol 
ID8135178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4719342 
End bp4719965 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content56% 
IMG OID644867497 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_003019730 
Protein GI253690540 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGTTGA CCGAATCGCT GATTGCTTTT ACGTTTGCCG CGACGATATT AACCCTGACG 
CCGGGTTTGG ATACGGCCTT GATTTTACGC ACCGCGACCG TTGAAGGCAG TAAGAAAGCC
TTCCATGCCG CGTTTGGTAT TCAAGTCGGT TGCCTGATTT GGGGCGCGAT GGTGGCATTT
GGTCTGGGAA CGCTGATTGC GGCGTCGGAG CTGGCCTATA ACATCCTGAA ATGGTGCGGT
GCGGCGTACC TCTGCTGGCT GGGTTTGCAA ATGCTCCTGA AGCCCAGAAC CGAGCTGGTA
ATGGCGGCAT CACAAGACGC ACCAAAGCAT CAGAACTGGT TTCTCCGTGG CATGTTGGGT
AACGTTCTCA ATCCGAAAAT CGGCGTGTTC TATGTTTCAT TCCTGCCGCA ATTTATCCCT
GCCGGCCATT CGGTCGTGTT GTGGACTTAC CTGCTCGTTC TTATTCATGT CGTCATCGGC
ACGCTGTGGT CGTCTACGCT GATTGCTGCT ACGCGCCCGC TGTCGCGTTT TCTACGGCGC
GGCTCGGTCG TGAAATGGAT GGACCGAACG ACGGGCGTTC TCTTTCTGGC ATTCGCCGCG
CGTCTGGCTT TGTCCCGGCG GTAG
 
Protein sequence
MTLTESLIAF TFAATILTLT PGLDTALILR TATVEGSKKA FHAAFGIQVG CLIWGAMVAF 
GLGTLIAASE LAYNILKWCG AAYLCWLGLQ MLLKPRTELV MAASQDAPKH QNWFLRGMLG
NVLNPKIGVF YVSFLPQFIP AGHSVVLWTY LLVLIHVVIG TLWSSTLIAA TRPLSRFLRR
GSVVKWMDRT TGVLFLAFAA RLALSRR