Gene PC1_4170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4170 
Symbol 
ID8135168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp4707395 
End bp4707958 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content52% 
IMG OID644867487 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_003019720 
Protein GI253690530 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGCT GCGGCTGGGT TACACAAGAC ACCTTATATC AGGATTACCA CGATAACGAG 
TGGGGAAAGC CCTGTACCGA CAGCCAGAAG CTGTTTGAGT TACTGTGTCT GGAAGGCCAG 
CAGGCAGGTC TTTCCTGGAT CACGGTTCTG AAAAAACGCG AACACTATCG CCGCTGTTTC 
CACCAGTTCA ACCCTGAGCA AGTCGCACAA ATGACGCAGG ATGACGTAGA TCGGCTGGTG 
CAGGACAGCG GTATTATCCG CCATCGCGGG AAAATCGAGG CCATTATCAC CAATGCAAAA 
GTGTGGGTGG CAATGGAGAG CCAGGGAGAG AGCTTCTCGC ACTTCATTTG GGCTTTTGTC 
GGACACCAGC CACGCCTAAA TCATCCCGCG TCACTGGCAG AAGTCCCAGC TAAAACAGAC 
GTTTCAGATG CCATGTCCAA AGCCCTGAAG AAACGCGGCT TCAAATTTAT CGGTTCGACT 
ATCTGCTATG CCTTCATGCA AGCAGGTGGA TTGGTCAATG ACCATGTCAC CGACTGTTTT 
TGTCATCAGG AAAGCGCGTC ATGA
 
Protein sequence
MQRCGWVTQD TLYQDYHDNE WGKPCTDSQK LFELLCLEGQ QAGLSWITVL KKREHYRRCF 
HQFNPEQVAQ MTQDDVDRLV QDSGIIRHRG KIEAIITNAK VWVAMESQGE SFSHFIWAFV 
GHQPRLNHPA SLAEVPAKTD VSDAMSKALK KRGFKFIGST ICYAFMQAGG LVNDHVTDCF 
CHQESAS