| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4168 |
|---|
| Symbol | glyQ |
|---|
| ID | 8135166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 4705275 |
|---|
| End bp | 4706189 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644867485 |
|---|
| Product | glycyl-tRNA synthetase subunit alpha |
|---|
| Protein accession | YP_003019718 |
|---|
| Protein GI | 253690528 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAGT TTGATACCAA GACCTTCCAG GGCCTGATCC TGACATTACA GGATTATTGG
GCTCGCCAGG GCTGCACCAT TGTTCAACCA TTGGACATGG AAGTCGGCGC AGGCACCTCA
CATCCTATGA CCTGCCTGCG GGCACTGGGG CCGGAGCCAA TGGCCGCCGC CTATGTGCAG
CCTTCTCGTC GTCCGACCGA TGGGCGCTAC GGCGAAAACC CGAACCGCTT ACAGCACTAT
TACCAGTTTC AGGTCGTCAT TAAGCCATCA CCGGACAATA TTCAGGAGCT GTACCTCGGT
TCTCTGAAAG AGCTGGGTAT GGATCCGACC ATTCACGATA TTCGTTTCGT GGAAGACAAC
TGGGAAAACC CGACGCTGGG TGCCTGGGGT CTGGGCTGGG AAGTCTGGCT GAACGGTATG
GAAGTCACGC AGTTTACCTA CTTCCAGCAG GTTGGCGGTT TGGAATGTAA ACCGGTGACG
GGTGAGATCA CCTACGGTCT GGAACGTCTG GCGATGTACA TTCAGGGCGT TGATAGCGTT
TACGATCTGG TATGGAGCGA TGGCCCGTTA GGTAAAACCA CCTACGGCGA TGTGTTCCAT
CAAAACGAAG TCGAGCAGTC GACCTACAAC TTTGAACACG CTGACGTTGA TTTCCTGTTC
AGCTGCTTCG AGCAATATGA GAAAGAAGCG CAGCACCTGC TGGCGCTGGA AAAACCGCTG
CCTTTACCGG CTTACGAACG CATTCTGAAA GCGGCGCACA GCTTTAACCT GCTGGATGCG
CGTAAAGCGA TCTCGGTTAC CGAGCGCCAG CGCTACATTC TGCGTATTCG TACCCTGACC
AAAGCGGTTG CGGAAGCCTA CTATGCCTCG CGTGAGGCGC TGGGTTTCCC GATGTGTAAT
AAGAAAGAGA GCTAA
|
|---|
| Protein sequence | MQKFDTKTFQ GLILTLQDYW ARQGCTIVQP LDMEVGAGTS HPMTCLRALG PEPMAAAYVQ
PSRRPTDGRY GENPNRLQHY YQFQVVIKPS PDNIQELYLG SLKELGMDPT IHDIRFVEDN
WENPTLGAWG LGWEVWLNGM EVTQFTYFQQ VGGLECKPVT GEITYGLERL AMYIQGVDSV
YDLVWSDGPL GKTTYGDVFH QNEVEQSTYN FEHADVDFLF SCFEQYEKEA QHLLALEKPL
PLPAYERILK AAHSFNLLDA RKAISVTERQ RYILRIRTLT KAVAEAYYAS REALGFPMCN
KKES
|
|---|
| |