| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4167 |
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| Symbol | glyS |
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| ID | 8135165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4703196 |
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| End bp | 4705265 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644867484 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_003019717 |
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| Protein GI | 253690527 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACA AGACTTTTCT GGTGGAAATT GGCACGGAAG AGCTGCCGCC GAAGGCTCTC
CGTAATCTGG CAGAATCCTT TGCCGCTAAT TTCACGGCGG AGCTGGATGC CGCCAATCTG
GCGCACGGTG AGGTGAGCTG GTTTGCTGCG CCGCGCCGTC TGGCGCTGAA AGTGGCACGC
TTAAGCGCTT CTCAGCCCGA TCGTGAAGTA GAAAAACGCG GCCCGGCGAT TGCACAAGCA
TTTGATGCTG AAGGGAAAAC CACCAAAGCG GCAGAAGGCT GGGCGCGTGG CTGTGGTATC
ACCGTTGAGC AAGCTGAGCG TTTGACGACC GATAAAGGCG AGTGGCTGCT GTATCGCGCC
CACGCGAAAG GCGAGCAGGC GCAGGCGCTG CTGGCCGGCA TGATAAGCAC CGCATTATCG
AAGCTGCCAA TTCCAAAGCT GATGCGCTGG AGCGACAAAG AAACGCAGTT TGTGCGTCCG
GTACATACCG TAACTATGCT GCTGGGTGAC GAATTGATCC CCGGTCAGGT ATTGGGTATC
CATTCTGCTC GTACCCTTCG CGGTCACCGC TTTATGGGTG AGGCTGAATT CACGATTGAT
AGCGCCGACC AGTATCCGCA GATTCTGCTG GAGCGCGGCA AAGTCGTCGC CGACTACGAT
GCGCGTAAAG CGAAAATCAA AGCCGATGCG GAAGAAGCCG CCCGCAAGAT TGGCGGTAAT
GCCGATCTGA GCGACAGCCT GCTGGAAGAA GTCACCTCGC TGGTGGAATG GCCAGTGGTA
TTGACCGCGA AATTTGAAGA AAAATTCCTC GCTGTGCCGT CCGAAGCGCT GGTTTACACC
ATGAAAGGTG ACCAGAAGTA TTTCCCTGTT TACGACAACA GTGGCAATCT GCTGCCGAAC
TTCATCTTTG TTGCCAACAT TGAATCCAAA GATCCACAGC AGATTATTTC CGGTAACGAA
AAAGTGGTGC GCCCGCGTCT GGCGGATGCT GAATTCTTCT TCAATACTGA CCGCAAAAAG
CGTCTGGAAG ATCACCTGCC GCGTCTGGAA ACCGTTTTGT TCCAGCAGCA GTTGGGTACG
CTGCGCGACA AAACCGATCG CATTCAGGCG CTGGCGGGCT GGGTAGCTGG TCAGATTGGT
GCTGATGTGA ATCACGCGAC GCGTGCGGGT CTGCTGTCCA AGTGTGACCT GATGACCAAC
ATGGTGTTTG AATTCACCGA CACGCAGGGC GTGATGGGAA TGCACTATGC GCGCCATGAT
GGCGAAGCCG AAGATGTTGC CGTTGCGCTG AATGAGCAAT ATCAGCCGCG CTTTGCGGGT
GATGAACTGC CGTCTTCTGC GGTGGCCTGT GCGCTGGCGA TTGCCGACAA GATGGATACG
CTGGCAGGGA TTTTTGGCAT TGGCCAACAT CCAAAAGGCG ACAAAGATCC GTTTGCGCTG
CGTCGTGCCG CCCTTGGTGT ACTGCGCATC ATCGTCGAAA AACGCCTGCC GCTGGATTTG
CAGACGCTGA CCGAAGAAGC GGTGCGTTTG TATGGCGCCA AGCTGACTAA CGCCAACGTT
GTGGATGACG TGATTGAGTT TATGCTCGGC CGTTTCCGCG CCTGGTATCA GGAAGAAGGC
CACAGCGTAG ATACCATTCA GGCGGTATTG GCGCGTCGTC CAACTCGTCC GGCAGATTTC
GATGCCCGCG TGAAAGCCGT CAGCCACTTC CGTTCGCTGG ATGCTGCCGC AGCGCTGGCC
GCGGCTAACA AGCGCGTTTC CAACATTCTG GCGAAATCCA CCGATACGCT GAACGAGAGC
GTCAACGCTG CCGTATTGAA AGACGCGGCG GAAATTACGC TGGCAACTCA CCTTGTTGTG
CTGCGCGATA AACTGACGCC ACTGTTCGCT GAAGGCCGCT ATCAGGAAGC GCTGGTTGAG
CTGGCCTCAC TGCGTGAACC TGTCGATGCA TTCTTCGATC AGGTGATGGT CATGGCAGAA
GATGAGCAGG TGCGTGTGAA CCGCCTGACG CTGCTGAGCC AACTGCGTGA GCTGTTCTTG
CAGGTAGCTG ATATTTCCGT GCTGCAATAA
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| Protein sequence | MTDKTFLVEI GTEELPPKAL RNLAESFAAN FTAELDAANL AHGEVSWFAA PRRLALKVAR
LSASQPDREV EKRGPAIAQA FDAEGKTTKA AEGWARGCGI TVEQAERLTT DKGEWLLYRA
HAKGEQAQAL LAGMISTALS KLPIPKLMRW SDKETQFVRP VHTVTMLLGD ELIPGQVLGI
HSARTLRGHR FMGEAEFTID SADQYPQILL ERGKVVADYD ARKAKIKADA EEAARKIGGN
ADLSDSLLEE VTSLVEWPVV LTAKFEEKFL AVPSEALVYT MKGDQKYFPV YDNSGNLLPN
FIFVANIESK DPQQIISGNE KVVRPRLADA EFFFNTDRKK RLEDHLPRLE TVLFQQQLGT
LRDKTDRIQA LAGWVAGQIG ADVNHATRAG LLSKCDLMTN MVFEFTDTQG VMGMHYARHD
GEAEDVAVAL NEQYQPRFAG DELPSSAVAC ALAIADKMDT LAGIFGIGQH PKGDKDPFAL
RRAALGVLRI IVEKRLPLDL QTLTEEAVRL YGAKLTNANV VDDVIEFMLG RFRAWYQEEG
HSVDTIQAVL ARRPTRPADF DARVKAVSHF RSLDAAAALA AANKRVSNIL AKSTDTLNES
VNAAVLKDAA EITLATHLVV LRDKLTPLFA EGRYQEALVE LASLREPVDA FFDQVMVMAE
DEQVRVNRLT LLSQLRELFL QVADISVLQ
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