| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4155 |
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| Symbol | |
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| ID | 8135153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4687450 |
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| End bp | 4688772 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644867472 |
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| Product | xylose isomerase |
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| Protein accession | YP_003019705 |
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| Protein GI | 253690515 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCCT ATTTTGAACA GATCGAAAAA GTCCGTTATG AAGGTAGCCA AAGCGACAAT
CCCTTCGCCT TTCGTCACTA CAATCCCGAT CAGGAAATTC TTGGGAAACG GATGGCTGAC
CATTTGCGTT TTGCCGTCGC GTATTGGCAC ACGTTCTGCT GGAACGGCGC GGATATGTTC
GGCGTCGGAT CTTTTGCTCG GCCGTGGCAA CAGTCAGGCG ACGCGCTGGA GCTAGCGAAG
CGCAAGGCGG ACATCGCATT CGAATTCTTT CAAAAGCTGA GCGTGCCTTA CTACTGCTTT
CATGACGTCG ATATCGCACC GGAAGGAAAC TCACTGAAAG AGTATCTGCA TAATTTTGCG
GTTATCACCG ATGTGCTGGC GGAAAAGCAG CAGGATAGCG GCGTGAAGCT GCTGTGGGGC
ACCGCCAACT GCTTTACCCA TCCTCGCTAT GGCGCAGGCG CGGCCACCAA CCCTGACCCA
GATGTCTTTG CCTGGGCGGC TACGCAGGTG TTCACGGCAA TGAACGCGAC CAAAAAACTG
GGTGGCGAGA ACTATGTGCT GTGGGGCGGG CGCGAAGGGT ATGAAACCCT GCTTAATACC
GACCTGCGTC AGGAGCGTGA ACAAATCGGC CGCTTCATGC AGATGGTCGT CGAACATAAA
CACAAAATCG GCTTTCAGGG CACGCTGCTC ATCGAGCCGA AGCCACAGGA GCCAACCAAG
CACCAGTACG ACTACGATGT CGCCACCGTT TATGGTTTCC TGAAACAGTT TGGGCTGGAA
AAAGAGATTA AAGTCAACGT GGAAGCCAAC CACGCTACGC TGGCAGGCCA TTCATTCCAT
CATGAAATCG CCACCGCTGT CGCACTGGGC GTATTCGGAT CTGTCGATGC GAACCGCGGC
GATCCGCAGC TCGGCTGGGA CACCGATCAG TTCCCTAACA GCGTGGAAGA GAACACGCTG
ATCATGTATG AAATTCTCAA GGCGGGTGGC TTCACGACGG GTGGGCTGAA CTTTGACGCA
AAAGTTCGTC GCCAAAGCAC CGATCGCTAT GACCTTTTCC ACGCGCATAT CGGCGCGATG
GATACAATGG CACTGGCGCT CAAGGCCGCA GCCAGAATGA TTGAAGATGA TAAACTCAAT
CAGTTGGTTG CTAAACGCTA TGCAGGCTGG AACGGAGAAC TGGGTCAGCA AATCCTGCAA
GGCAAGGCTT CGCTGGAATC ACTTGCCCAC TATGCAGAAA GCCATCAGCT GGCACCACAG
CACCAGAGTG GTCAGCAGGA ATTGCTGGAA AACCTGGTTA ACCGCCACCT ATACCCTAAA
TAA
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| Protein sequence | MQAYFEQIEK VRYEGSQSDN PFAFRHYNPD QEILGKRMAD HLRFAVAYWH TFCWNGADMF
GVGSFARPWQ QSGDALELAK RKADIAFEFF QKLSVPYYCF HDVDIAPEGN SLKEYLHNFA
VITDVLAEKQ QDSGVKLLWG TANCFTHPRY GAGAATNPDP DVFAWAATQV FTAMNATKKL
GGENYVLWGG REGYETLLNT DLRQEREQIG RFMQMVVEHK HKIGFQGTLL IEPKPQEPTK
HQYDYDVATV YGFLKQFGLE KEIKVNVEAN HATLAGHSFH HEIATAVALG VFGSVDANRG
DPQLGWDTDQ FPNSVEENTL IMYEILKAGG FTTGGLNFDA KVRRQSTDRY DLFHAHIGAM
DTMALALKAA ARMIEDDKLN QLVAKRYAGW NGELGQQILQ GKASLESLAH YAESHQLAPQ
HQSGQQELLE NLVNRHLYPK
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