| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4144 |
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| Symbol | |
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| ID | 8135142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4673112 |
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| End bp | 4674662 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644867461 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003019694 |
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| Protein GI | 253690504 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.94916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAAGA CACGTTCGGC GGTCGCGGTT GACGACCGAT ACAAGGTACT TGCGGCGATC
TGCGTCTCCG CGATCATCAT CCCTTTGGTA TTCACTGGCC CGGCGATTTC TACGCCAGCG
GTCGGGTGCG ATCTGGGCGG AGACCAGTCC ACCTTGAGCT GGATCGTCAA CGCCTACGCT
ATCGCATTCG GCGGTTGCGT CATGGCGGCG GGTGCCATCG GCGACCAGAT CGGCCGCAAG
CGATGCTTCG TCGTGGGACT CTGGATCTTC GTCATCACGT CGTTACTGAT CGGCCTGACC
CCGAACTTGC TGCTGCTCAA CCTGCTGCGC GCCGCCGAAG GTGTCGGCGG TGCTCTGGTG
CTGACTTCGG CCACCTCGTT GCTGGCACAG GAGTTCGAAG GCGCAGAACG TACTCAGGCT
TTCAGCTTTC TTGGTACCGC ATTTGGCGTC GGTCTTGCGT TCGGGCCAAT GGCCTCGGGA
TTCCTGATCG AGCATTTGGG TTGGCGTTCG CTCTACTTCG CCATCGCGTT GATTGCGGTC
TTGATCCTGC TCTTGGGTAC ACGGCGGATC AGGGAGTCCC GTGACCCGGA GGCGCAAGGT
ATTGACTGGC TGGGCACGGT ACTGTTCACG GTCGCGCTGG TGTCGTTGAC GTTCGGCATC
GTGCGGGGGC CGCAAGATGG CTGGGTGAGC CTGCGCGTGT TGTTTCTGCT GGGTGGTGCT
GTCCTGCTGC TTGGTGCTTT CGTCGCCGTG GAACTGCGGC GTCCGCGTCC CATGCTGGAG
CTGTCCCTTT TCCGCTATCC GCGCTTCATT GGGGTGCAAC TGCTGCCAGT GGCAACGGGT
TTCAGCTTCA TCGCCCTGAT CGTTTATGTG CCGATCTGGT TCATCGCCAT TCAGGGGCGT
GATGCATTCA CGGCCGGCCT GGCGATCCTG CCGCTAACCG CGCCGATGCT GGTGGTGCCA
TTGCTGGCCG GACGGATGGC CCAGCGGGTC TCGCCCGGCC TACTGTCGGG GATCGGCTTC
CTTCTCTCCG CGCTCGGTGC CTGGCTGTTG ATGCGCTTGT CGCCTGATGG AAGCCTGTGG
TCAATGGCGA TTCCCATGCT GCTGGTCGGC ATTGGCAATG GCCTGCCGTG GGGGTTGATG
GATGCTTTAT CGGTGAGCGT GGTTCCCAAG GCGCGCGCAG GGATGGCCGC TGGCATCTTC
ACCACCATGC GCGTAGCAGG AGAAGCCATC GCCATTGCGG CCATCGGTGC CGTATTGGTT
GGCTTAACGG CGGCGAATTT ACGTACGGCA GCAGAGGCAG GGGCGATTTC GCTACCGGAA
GGTGCTACGG CGATTGCCAG CCAGATCGGA GCCAGCGGTG GGCACGGTAC TTCTATCGGT
AGCGGCGGCG CGATGGACGG GGCTGTCATT GAACTTGCTC ATCGCGCTTA CACATCAGCT
TTCCACAGCA TCTTTGGCGT GCTGGCCGTA CTCTCGATCC TGACTGCCGT AGTCTGCATT
GCGACACTAC GACAGTCAGC CGATAGGCTG GATACAGACT TGAAGTCTTG A
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| Protein sequence | MEKTRSAVAV DDRYKVLAAI CVSAIIIPLV FTGPAISTPA VGCDLGGDQS TLSWIVNAYA
IAFGGCVMAA GAIGDQIGRK RCFVVGLWIF VITSLLIGLT PNLLLLNLLR AAEGVGGALV
LTSATSLLAQ EFEGAERTQA FSFLGTAFGV GLAFGPMASG FLIEHLGWRS LYFAIALIAV
LILLLGTRRI RESRDPEAQG IDWLGTVLFT VALVSLTFGI VRGPQDGWVS LRVLFLLGGA
VLLLGAFVAV ELRRPRPMLE LSLFRYPRFI GVQLLPVATG FSFIALIVYV PIWFIAIQGR
DAFTAGLAIL PLTAPMLVVP LLAGRMAQRV SPGLLSGIGF LLSALGAWLL MRLSPDGSLW
SMAIPMLLVG IGNGLPWGLM DALSVSVVPK ARAGMAAGIF TTMRVAGEAI AIAAIGAVLV
GLTAANLRTA AEAGAISLPE GATAIASQIG ASGGHGTSIG SGGAMDGAVI ELAHRAYTSA
FHSIFGVLAV LSILTAVVCI ATLRQSADRL DTDLKS
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