Gene PC1_4143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4143 
Symbol 
ID8135141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4672646 
End bp4672987 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content51% 
IMG OID644867460 
ProductGlpM family protein 
Protein accessionYP_003019693 
Protein GI253690503 
COG category[R] General function prediction only 
COG ID[COG3136] Uncharacterized membrane protein required for alginate biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTGT TTATCAAATC GGTTATTGGC GCGTTGATCG TATTGCTCAT CAGCGTACTG 
GCGAAAAGTC GAAACTATTA TATTGCCGGG TTGGTGCCGC TATTTCCCAC ATTCGCGCTG
ATTGCCCATT ATATCGTTGG CACCGAGCGC GGGCTGGAGG CGCTACGCGC CACTATCCTG
TTTGGCATTT GGTCAGTTAT TCCTTATCTG GTTTATCTCA TCTCACTTTA TTACTTTACC
GCGTGGATGA AGTTGCCACA GGCGCTGCTC GCCGCGGTCG TGTGCTGGAG TGTGTCAGCG
GCACTGCTGA TCAAGGTCTG GACGTGGTAT CAGGGGAATT AA
 
Protein sequence
MSLFIKSVIG ALIVLLISVL AKSRNYYIAG LVPLFPTFAL IAHYIVGTER GLEALRATIL 
FGIWSVIPYL VYLISLYYFT AWMKLPQALL AAVVCWSVSA ALLIKVWTWY QGN