Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4143 |
Symbol | |
ID | 8135141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4672646 |
End bp | 4672987 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644867460 |
Product | GlpM family protein |
Protein accession | YP_003019693 |
Protein GI | 253690503 |
COG category | [R] General function prediction only |
COG ID | [COG3136] Uncharacterized membrane protein required for alginate biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTGT TTATCAAATC GGTTATTGGC GCGTTGATCG TATTGCTCAT CAGCGTACTG GCGAAAAGTC GAAACTATTA TATTGCCGGG TTGGTGCCGC TATTTCCCAC ATTCGCGCTG ATTGCCCATT ATATCGTTGG CACCGAGCGC GGGCTGGAGG CGCTACGCGC CACTATCCTG TTTGGCATTT GGTCAGTTAT TCCTTATCTG GTTTATCTCA TCTCACTTTA TTACTTTACC GCGTGGATGA AGTTGCCACA GGCGCTGCTC GCCGCGGTCG TGTGCTGGAG TGTGTCAGCG GCACTGCTGA TCAAGGTCTG GACGTGGTAT CAGGGGAATT AA
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Protein sequence | MSLFIKSVIG ALIVLLISVL AKSRNYYIAG LVPLFPTFAL IAHYIVGTER GLEALRATIL FGIWSVIPYL VYLISLYYFT AWMKLPQALL AAVVCWSVSA ALLIKVWTWY QGN
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