Gene PC1_4120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4120 
Symbol 
ID8135118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp4653037 
End bp4653615 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content43% 
IMG OID644867437 
Productprophage antirepressor 
Protein accessionYP_003019670 
Protein GI253690480 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0152271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTATAG AAAAAAGCAG ATTAAATTCT GAGGTCATCC CTCAATTCAT CACCAGCCAG 
AAAGATATTT TCCAAGCCGC CGAATTCGAT GTTTCAGTTA TTAAATTCGA GGATAAAACT 
ATCCGTATTG TAAATGTTTA CGGTGAACCG TGGTTTATAG TTAAGGATAT TTGTGAGGTG 
CTGAGTTTGA GTAACTCACA CATGGCGTTG AATGAGCATG AAAAGAATAC AATAAGTCTG 
ACTTACGATA ATCGTGGCAA TCCGAATTAT GACGTCATCG CAGAGTCCGG TTTCTATAAA 
CTGCTCGCCT TCAACTGTAA GACTTCGCCC CCCGATACAT TCATCCACCG TTTTAGTAAT 
TGGGTATTTG AAGTTATCCC TTCTATTCGT AAGACAGGTT CCTACGGTGT GCCGTTCGCC 
TCTCTAAACG ACCATAGCCG CCGTAAGGCA CTGTATAACA AGAAGGCGAG TAAACGCGGC 
AAAGACTTAC AGGCTTGCAA GGGCGAGAAA TCCCGCCTGA TCGCTGAAGA AGCTGAGTTA 
TGGCATAAAT ATCAGCCGCA ATTACCGGGG TTTCATTGA
 
Protein sequence
MPIEKSRLNS EVIPQFITSQ KDIFQAAEFD VSVIKFEDKT IRIVNVYGEP WFIVKDICEV 
LSLSNSHMAL NEHEKNTISL TYDNRGNPNY DVIAESGFYK LLAFNCKTSP PDTFIHRFSN 
WVFEVIPSIR KTGSYGVPFA SLNDHSRRKA LYNKKASKRG KDLQACKGEK SRLIAEEAEL 
WHKYQPQLPG FH