| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4106 |
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| Symbol | rph |
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| ID | 8135104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4639162 |
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| End bp | 4639878 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644867424 |
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| Product | ribonuclease PH |
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| Protein accession | YP_003019657 |
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| Protein GI | 253690467 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0374298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCCCAA CAGGCCGAAG TGCACAGCAA GTACGCCCCC TTAAATTGAC CCGTCATTAC
ACGAAACACG CCGAAGGTTC CGTTTTAGTC GAATTTGGCG ACACCAAAGT GTTATGCAAT
GCCACGGTAG AAGAGGGTGT TCCGCGCTTT CTGAAAGGCC AGGGGCAAGG ATGGGTTACC
GCCGAATACG GCATGCTGCC GCGCGCGACG CACAGCCGTA ACGCCCGTGA AGCCGCTAAA
GGCAAGCAGG GCGGGCGGAC GCTGGAGATT CAGCGCCTGA TTGCGCGCTC CCTGCGTGCA
GCTATCGACC TGAAAGTGCT CGGCGAATAC ACCATTACGC TCGACTGCGA TGTATTGCAG
GCGGACGGCG GTACGCGTAC GGCGTCCATC ACCGGTGCCT GCGTGGCGCT GGCCGATGCG
CTGAACCAGA TGGTGGCCAA CGGCAAGCTG AAAAAGAACC CGATGAAAGG CATGGTCGCG
GCGGTTTCCG TCGGCATCGT GAACGGCGAA GCGTTGTGCG ATCTGGAATA TGTGGAAGAT
TCCGCCGCTG AGACCGACAT GAATGTGGTC ATGACCGAAG ACGGTCGCAT GATTGAAGTG
CAGGGGACCG CCGAAGGCGA ACCGTTCAGC CATGAAGAAT TACTCTCCCT GCTGGCGTTA
GCCCGAGGGG GAATCGAGAC CATCGTTCAG GCGCAGAAAG CCGCCTTAAT CGATTGA
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| Protein sequence | MRPTGRSAQQ VRPLKLTRHY TKHAEGSVLV EFGDTKVLCN ATVEEGVPRF LKGQGQGWVT
AEYGMLPRAT HSRNAREAAK GKQGGRTLEI QRLIARSLRA AIDLKVLGEY TITLDCDVLQ
ADGGTRTASI TGACVALADA LNQMVANGKL KKNPMKGMVA AVSVGIVNGE ALCDLEYVED
SAAETDMNVV MTEDGRMIEV QGTAEGEPFS HEELLSLLAL ARGGIETIVQ AQKAALID
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