Gene PC1_4102 details

Gene Information

• Locus tag: PC1_4102
• Symbol: dut
• ID: 8135100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 4636890
• End bp: 4637348
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 644867420
• Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
• Protein accession: YP_003019653
• Protein GI: 253690463
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0756] dUTPase
• TIGRFAM ID: [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0657784
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAAAA AAATCGACGT TAAGATTGTT GACCCACGCG TTGGGCAGCA ATTCCCGTTA 
CCAACCTATG CCACACCGGG TTCTGCCGGG CTCGATCTGC GTGCCTGTCT GGATCAGGCG 
ATTGAACTCA AAGCAGGGGA AACGACCCTG ATTCCAACCG GACTGGCGAT TCACATTGCC 
GATACCGGGC TGGCGGCGGT CATCCTTCCT CGTTCCGGCT TAGGCCACAA GCACGGCGTG 
GTGCTGGGGA ATCTGGTTGG GCTGATTGAT TCGGACTATC AGGGGCAACT GATGGTTTCC 
GTCTGGAACC GTGGTCAACA AACGTTTACG GTTGAGCCGG GTGAGCGTAT CGCACAGATG 
GTCTTTGTGC CTGTCGTTCA GGCCGAATTT AATCTGGTCG AAGATTTCGT CAGCAGCGAA 
CGTGGAGAAG GCGGCTTCGG CCACTCCGGC CGTAGCTAA 

 

Protein sequence

MMKKIDVKIV DPRVGQQFPL PTYATPGSAG LDLRACLDQA IELKAGETTL IPTGLAIHIA 
DTGLAAVILP RSGLGHKHGV VLGNLVGLID SDYQGQLMVS VWNRGQQTFT VEPGERIAQM 
VFVPVVQAEF NLVEDFVSSE RGEGGFGHSG RS