| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4097 |
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| Symbol | |
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| ID | 8135095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4633132 |
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| End bp | 4633941 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644867415 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_003019648 |
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| Protein GI | 253690458 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0739878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAAT TACCTGAGGT TGAAACCAGT CGTCGGGGGA TTTCACCGTA CCTTGTCGAT
CACACCATTC TGTATGCTGA GGTCAGGAAC ACGCGCCTGC GCTGGCCGGT GTCGGGTGAG
ATCCTCTCGC TGAGTGATGA GCCGGTGCTG AGCGTGCGTC GGCGGGCAAA GTATTTGCTA
ATTGAACTCA CGCGCGGCTG GATTATTGTG CATCTCGGCA TGTCTGGCAG CCTGCGAGTG
TTGCCGGAAT ATAGTGAGCC GGAGAAACAC GATCATGTTG ATTTGGTGAT GGACAGCGGT
AAGGTGCTGC GTTACACCGA TCCACGACGT TTTGGTGCCT GGCTGTGGAC GGATAATCCA
GAAACCTGCT CGGTCTTGGC GCATTTGGGG CCAGAGCCGT TAGAGGCGGA ATTCTCCGCA
GATTATCTCT ATCAGGCCTC ACGCGGTAAA AAGACGGCAA TCAAACAGTG GATTATGGAT
AACAAAGTAG TCGTTGGCGT AGGCAATATC TACGCGAGTG AATCGCTGTT TGCTGCTGGC
ATCCACCCTG ACAGAGCGGC CGGATCGTTA AATGAAAACG ACGCAGCCGT ATTAGTGAGC
GTGATTAAAC AGGTGCTACA GCTTTCGATT GAGCAGGGCG GCACGACGCT ACGCGACTTT
TTGCAATCTG ACGGTAAACC CGGCTATTTC GCGCAGGAAC TACGAGTCTA TGGCCGCAAT
GGTGAACCGT GCCGGACATG TGGAACACCG ATCGAAACCG CGAAACATGG GCAGCGCAGT
ACGTTCTTCT GCCGCCGCTG TCAGAAGTAA
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| Protein sequence | MPELPEVETS RRGISPYLVD HTILYAEVRN TRLRWPVSGE ILSLSDEPVL SVRRRAKYLL
IELTRGWIIV HLGMSGSLRV LPEYSEPEKH DHVDLVMDSG KVLRYTDPRR FGAWLWTDNP
ETCSVLAHLG PEPLEAEFSA DYLYQASRGK KTAIKQWIMD NKVVVGVGNI YASESLFAAG
IHPDRAAGSL NENDAAVLVS VIKQVLQLSI EQGGTTLRDF LQSDGKPGYF AQELRVYGRN
GEPCRTCGTP IETAKHGQRS TFFCRRCQK
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