| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4093 |
|---|
| Symbol | |
|---|
| ID | 8135091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 4629429 |
|---|
| End bp | 4630202 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644867411 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003019644 |
|---|
| Protein GI | 253690454 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACACGC ATAAACGTTT ATCCGTTGTC ATGATTACCA AAAATGAAAC AGAGCTGATC
GCCGATTGCC TCCAGTCTGT CGCATGGGCA GATGAAATTA TTGTCGTCGA TTCCGGCAGC
ACAGATAACA CGGTAGAGAT CGCGCATCAA TACGGTGCCA AAGTCTATCA ACACGACGAC
TGGCCGGGAT ATGGCAAGCA GCGACAGCGT GCGCAGAATT ATGCCAGCGG TGATTATATT
TTCATGATTG ATGCTGATGA GCGAGTGACG CCTGAGTTAC GGCAATCAAT TGAAGCCGTG
CTTGCTGCCT CAGACGCTGA CGATAATACG GTTTACCACT GCTCACGGCG CAATTTTTTC
CTTGGTCGTT TTATGAAACA TAGCGGATGG TATCCCGATA ACGTTATCCG CCTCTATGCG
AATCAGCGCT ACCGCTATAA CGACAACAGC GTGCACGAAT CTCTTGATTA TGGCTCAGCC
ACATTGACGC ATCTATCAGG TGATTTATTG CATTTAACCT GCCGAGACTT CGCTGCTTTT
CAACAGAAAC AGTTACGCTA CGCTTCGGCA TGGGCGGAGG AACGACACCG TCAGGGGAAA
AAATGCCGCT ACCTGAGTAT CCTGACGCAT ACTGCTTCGG CATTCTTAAA AACCTGGATA
TTACGTGTCG GTTTTTTAGA TGGGAAACAC GGTTTTCTAC TCGCGATTAT TAATGCACAG
TACACATTCA ATAAATACGC TGGGTTATGG TCCCGTAATA ATATAAAGTT GTGA
|
|---|
| Protein sequence | MNTHKRLSVV MITKNETELI ADCLQSVAWA DEIIVVDSGS TDNTVEIAHQ YGAKVYQHDD
WPGYGKQRQR AQNYASGDYI FMIDADERVT PELRQSIEAV LAASDADDNT VYHCSRRNFF
LGRFMKHSGW YPDNVIRLYA NQRYRYNDNS VHESLDYGSA TLTHLSGDLL HLTCRDFAAF
QQKQLRYASA WAEERHRQGK KCRYLSILTH TASAFLKTWI LRVGFLDGKH GFLLAIINAQ
YTFNKYAGLW SRNNIKL
|
|---|
| |