| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4089 |
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| Symbol | |
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| ID | 8135087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4624865 |
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| End bp | 4625914 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644867407 |
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| Product | ADP-heptose:LPS heptosyltransferase II |
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| Protein accession | YP_003019640 |
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| Protein GI | 253690450 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTT TGGTCATCGG CCCTTCCTGG GTCGGCGATA TGATGATGTC GCACAGCCTT
TATCGCACGT TGAAGGCTGA ACACCCGGAA GCGGTTATTG ACGTGATGGC GCCAGCCTGG
TGCCGTCCGC TGCTGGCACG TATGCCGGAA GTCAATCAGG CATTAGCCAT GCCGCTAGGT
CACGGCGCAC TTGAGCTGGG CGAACGTCGC CGTCTTGGCG TATCGCTGCG CGATGCAGGT
TACGATCGCG CTTACGTGCT GCCCAACTCC TTTAAATCCG CGCTGGTTCC GTTCTTTGCC
AACATTCCAC AGCGCACAGG CTGGCGCGGA GAAATGCGTT ACGGGCTGCT GAACGACTTA
CGCGTGCTGG ATAAGGCGGC ATTCCCGCTG ATGGTTCAGC GTTACGCCGC ATTAGCTTAT
GACCGTAGCC GTATTCGTCG TGCTGAGGAT CTGCCGCAGC CGTTACTGTG GCCACAGTTA
CAGGTCAATC AGGCGGAAAT TGCAGACACG ATGCAGGCCT TCGACCTCAG CGATACACGC
CCCATCGTCG GCTTTTGCCC CGGTGCCGAA TTCGGCCCCG CTAAACGGTG GCCGCATTAT
CACTATGCTG CGCTGGCGCA ATCACTGATT GAGCGCGGCT ACCAGATCGC GCTGTTCGGT
TCAGCCAATG ACCGTTCAGC CTGTGACGAC ATTCTTCAGG GATTGACGGA AGACGCACGA
CAACATTGTG CCAGTCTGGC GGGAAAAACC TCGCTGGAAC AGGCAGTGGT GCTGATTGCC
GCCTGCCACG CCGTCGTCAG CAACGACTCC GGACTCATGC ACGTTGCTGC GGCGCTTCAT
CGTCCGCTTG TCGCGCTTTA CGGCCCGAGC AGCCCCGATT TTACCCCGCC GCTGTCCCAT
CAGGCCGAGG TGATTCGGCT GATCACCGGC TATCACCGGG TGCGAAAAGG GGATGCCGAA
CAGGGTTATC ACCAGAGTTT GATCGACATT CAGCCCGAAC GCGTGCTCAG CGCGCTCAAT
AAATATCTGC TGCCGGGAGC AGACGCATGA
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| Protein sequence | MKILVIGPSW VGDMMMSHSL YRTLKAEHPE AVIDVMAPAW CRPLLARMPE VNQALAMPLG
HGALELGERR RLGVSLRDAG YDRAYVLPNS FKSALVPFFA NIPQRTGWRG EMRYGLLNDL
RVLDKAAFPL MVQRYAALAY DRSRIRRAED LPQPLLWPQL QVNQAEIADT MQAFDLSDTR
PIVGFCPGAE FGPAKRWPHY HYAALAQSLI ERGYQIALFG SANDRSACDD ILQGLTEDAR
QHCASLAGKT SLEQAVVLIA ACHAVVSNDS GLMHVAAALH RPLVALYGPS SPDFTPPLSH
QAEVIRLITG YHRVRKGDAE QGYHQSLIDI QPERVLSALN KYLLPGADA
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