| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4081 |
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| Symbol | gpsA |
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| ID | 8135079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4616630 |
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| End bp | 4617649 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644867399 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_003019632 |
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| Protein GI | 253690442 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCGT CTGACGCTTC CATGACCGTC ATCGGTGCCG GTTCATACGG CACCGCTCTG
GCCATTACGC TAGCGCGTAA TGGCCATCGA GTCGTGCTTT GGGGCCACAA CCCTGCACAC
ATTCAGGCAT TACAGGCCGC TCGCTGTAAT CAGGCATTCC TGCCGGATGT CCCTTTCCCC
GATTCACTAC AGTTGGAAAC CAATCTGGGG CAGGCGCTTG CTGCCAGCAG AAACGTGCTG
GTTGTTGTGC CGAGCCATGT GTTTGGTGAT GTTCTGCGTC AGTTGAAACC GCATTTGCGT
GCCGATGCGC GTATCGTGTG GGCGACGAAA GGGCTGGAAG CGGAAACGGG ACGGTTGTTG
CAGGATGTCG CTCGCGAAGC GCTGGGCGAA ACCATTCCGC TTGCGGTGGT ATCCGGCCCG
ACATTCGCCA AAGAATTAGC AGCTGGCATG CCGACGGCTA TTGCTCTGGC ATCGACGGAC
CGTGAATTTG CTGACGATCT GCAACGTCTA CTGCACTGTG GAAAGAGCTT CCGCGTATAC
AGCAACCCAG ATTTTATCGG TGTGCAGCTG GGCGGGGCGG TGAAGAACGT CATTGCTATC
GGTGCCGGGA TGTCTGACGG CATTGGGTTT GGCGCAAATG CACGTACCGC ATTGATCACC
CGTGGGCTGG CTGAAATGAC TCGGCTTGGT ACGGCGCTGG GGGCGGATCC CACCACCTTC
ATGGGGATGG CTGGGCTGGG CGATCTGGTG CTGACCTGTA CTGATAATCA GTCCCGTAAC
CGGCGCTTTG GTATGATGCT GGGGCAGGGA ATGGATGTGC AGAGCGCGCA GGATAGCATT
GGTCAGGTTG TTGAAGGGTA TCGCAATACG AAAGAGGTTC TGGCATTAGC GCAACGCTAC
GGTGTTGAAA TGCCAATTAC TGAACAACTC TGGCAAGTTC TTTATTGCGG AAAAGACGCC
CGAGAGGCGG CACTGAGCCT GTTGGGGCGC ACGCGTAAAG ACGAAACCGC CAAATTATAA
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| Protein sequence | MNASDASMTV IGAGSYGTAL AITLARNGHR VVLWGHNPAH IQALQAARCN QAFLPDVPFP
DSLQLETNLG QALAASRNVL VVVPSHVFGD VLRQLKPHLR ADARIVWATK GLEAETGRLL
QDVAREALGE TIPLAVVSGP TFAKELAAGM PTAIALASTD REFADDLQRL LHCGKSFRVY
SNPDFIGVQL GGAVKNVIAI GAGMSDGIGF GANARTALIT RGLAEMTRLG TALGADPTTF
MGMAGLGDLV LTCTDNQSRN RRFGMMLGQG MDVQSAQDSI GQVVEGYRNT KEVLALAQRY
GVEMPITEQL WQVLYCGKDA REAALSLLGR TRKDETAKL
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