| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4044 |
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| Symbol | fadB |
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| ID | 8135042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4573216 |
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| End bp | 4575405 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644867362 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_003019595 |
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| Protein GI | 253690405 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.60238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTATC AAGGTGAATC CCTCTACCTT AACTGGCTTG AGGACGGCAT TGCCGAGCTG
GTATTTTCTG CCCCTGGCTC CGTAAACAAG CTAGATACCC GCACGGTTGC CAGCCTGGGT
AAGGCGCTGG ACGTTCTGGC GGAACAGCCG AATCTGAAGG GCTTACTGCT ACGCTCTGAC
AAACCTGCAT TTATTGTCGG TGCCGATATC ACGGAATTCC TTTCCCTTTT TGCCGCACCG
GCCGAAAAGC TGCATGAATG GCTTGTCTTC GCCAACCGCA TTTTTAGCCG TCTTGAGGAC
TTACCCGTTC CCACGCTGTC CGCGATTAAT AGCTATGCAC TGGGAGGCGG TTGTGAATGT
GTACTGGCAA CTGACTTTCG TTTAGCGACG CCGGATGCGC GTATCGGCTT ACCAGAAACG
AAGCTAGGGA TCATGCCGGG TTTTGGCGGC ACGGTCAGAT TGCCGCGCCT GCTGGGTACA
GATAGCGCAT TGGAAATTAT CGCCGCCGGT AAAGACGTCA GCGCAGCCGA TGCCTTAAAA
GTAGGACTGG TTCAGGCCGT GGTGACCAAT GACAAACTGG TTCCCGCTGC CATCAAGATG
TTGAAACAGG CGATTAACGG CTCACTGGAC TGGCAGGCTT ATCGGCGCCC GAAACTTGAA
GCGCTGAAGC TCAATAAGAT TGAAGCCATG ATGAGCTTTA CCACCGCCAA AGCGATAGTG
CTACAAACCG CCGGGAAGCA CTATCCAGCG CCCATGTTAG CGGTCAAAAC TATCGAAGCC
GCCGCGACCA TGACGCGCGA TGACGCATTG CAACTCGAAA CGCAGCACTT CGTTCAGTTG
GCGCGTTCCA ATGAAGCTCG GGCACTCGTC GGCATTTTCC TCAACGATCA GTATGTTAAA
GGTAAAGCGA AGAAGTTGAT TGGCGAGACA CCGGTGCCGC AGCAAGCGGC CGTTCTGGGT
GCAGGCATTA TGGGCGGCGG GATTGCCTAT CAATCCGCGT TCAAAGGCGT GCCGATTCGG
ATGAAAGATA TCAATGAGAA GCCGCTTGCG CTGGGGATGA ATGAAGCCGC CAAGCTCCTG
AATAAACAAA TGGAACGAGG CAAGCTGGAT GGAATGAAAA TGGCGACGAT TCTGGCCAGC
ATTCAGCCAA CGCTGGATTA CGCCGGCTTT GAGCGCACCA ACATCGTGGT TGAGGCCGTG
GTTGAGAACC CAAAAATCAA AGCCAGTGTA CTCGCCGAAA CTGAATCGCA CGTTAGCGAG
AATACGATTC TGGCTTCGAA TACCTCCACC ATCCCGATTG CTTCGCTCGC CGCATCGCTA
AAACGGCCGC AAAATTTCTG CGGAATGCAC TTCTTCAACC CAGTACACCG CATGCCGCTG
GTCGAAATTA TTCGCGGCCC TAAAACCAGC GACAGCACCA TCGCCAGCGT AGTGGCTTAC
GCCAGCAAAA TGGGTAAAAC GCCAATTGTC GTGAACGACT GCCCCGGATT CTTCGTGAAT
CGGGTGCTGT TCCCCTACTT TGCTGCATTC AGCTTACTGC TCAGAGACGG TGCCGATTTC
CGCGAGATCG ATAACGTCAT GGAGAAAAAA TTCGGTTGGC CGATGGGTCC AGCTTATCTG
CTGGATGTAG TCGGCATTGA CACCGCTCAC CATGCTCAGG CCGTCATGGC CGCTGGCTTT
CCACAGCGTA TGGCAAAAGA TTACCGCGAT GCGATTGATG TATTGTTTGA GCATCAGCGC
TTTGGGCAGA AAAACGGTCA GGGCTTCTAC CGCTATCAAA CCGATAGCAA AGGCAAGCCG
CGTAAAGAGC AGGATGAAGC CGTAAATACG CTCCTTAAAG ACATTAGCCA ACCGACAAAA
GCGTTCAGTG CAGAAGAGAT TATCGCTCGT ATGATGATCC CGATGATTAA TGAAGTCGCA
CGCTGTCTGG AGGAAGGTAT CATCGCCAGC CCTGCCGAAG CGGACATGGC GCTGGTATAC
GGGCTGGGTT TCCCTCCCTT CCACGGCGGT GCCTGCCGCT ATCTGGATAC ATTGGGCAGC
GAACGTTATG TCGAGATGGC GCAACAGTTG GCGCACCTCG GCGCAATCTA TCAGGTGCCA
GACGGCTTGC AGCAAAAAGC CAGAAGCAAT GAAGGCTATT ACCCATCGGT CGCGCCACAC
GCGGACGTTT CCCACGGTCA ACCGGCATGA
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| Protein sequence | MLYQGESLYL NWLEDGIAEL VFSAPGSVNK LDTRTVASLG KALDVLAEQP NLKGLLLRSD
KPAFIVGADI TEFLSLFAAP AEKLHEWLVF ANRIFSRLED LPVPTLSAIN SYALGGGCEC
VLATDFRLAT PDARIGLPET KLGIMPGFGG TVRLPRLLGT DSALEIIAAG KDVSAADALK
VGLVQAVVTN DKLVPAAIKM LKQAINGSLD WQAYRRPKLE ALKLNKIEAM MSFTTAKAIV
LQTAGKHYPA PMLAVKTIEA AATMTRDDAL QLETQHFVQL ARSNEARALV GIFLNDQYVK
GKAKKLIGET PVPQQAAVLG AGIMGGGIAY QSAFKGVPIR MKDINEKPLA LGMNEAAKLL
NKQMERGKLD GMKMATILAS IQPTLDYAGF ERTNIVVEAV VENPKIKASV LAETESHVSE
NTILASNTST IPIASLAASL KRPQNFCGMH FFNPVHRMPL VEIIRGPKTS DSTIASVVAY
ASKMGKTPIV VNDCPGFFVN RVLFPYFAAF SLLLRDGADF REIDNVMEKK FGWPMGPAYL
LDVVGIDTAH HAQAVMAAGF PQRMAKDYRD AIDVLFEHQR FGQKNGQGFY RYQTDSKGKP
RKEQDEAVNT LLKDISQPTK AFSAEEIIAR MMIPMINEVA RCLEEGIIAS PAEADMALVY
GLGFPPFHGG ACRYLDTLGS ERYVEMAQQL AHLGAIYQVP DGLQQKARSN EGYYPSVAPH
ADVSHGQPA
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