Gene PC1_4042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4042 
Symbol 
ID8135040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4571088 
End bp4571699 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content54% 
IMG OID644867360 
Producthypothetical protein 
Protein accessionYP_003019593 
Protein GI253690403 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0955788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCGT ATCCAATCCC TGCTGCGCCA GTGAGCTTCA GCGAGGAAAT CAAGAAAAGC 
CGCTTTACGA CGATCCTGGC GGCAACGCCA GGAATCGACG CGGCAAAAGC GTTTATCCAG 
CACGTCAGGG AAGAACACGC CTCGGCGGGT CACCACTGTT GGGCGTTTGT TGCGGGTGCG 
CCTGATGATT CGCAGCAACT GGGTTTTTCT GACGATGGTG AGCCTTCCGG CACGGCAGGT 
AAGCCGATGC TGTCGCAACT GATGGGAAGT GGCATCGGTG AAATTACGGC TGTGGTGGTG 
CGCTACTATG GTGGAATCCC GTTGGGCACC GGTGGGTTGG TGAAGGCCTA TGGCGGTGGC 
GTTCAGCAAG CGCTGAAGCT GATATCGCTG CAAGAGAAAG TGTTGCAAAA AGAGTATGGC 
TTACAATGTG ACTATGCACT GTTGCCTCAG GTGGAATCCC TGATCTTCCA GCTTGGCGGA 
AAAGTTTTGC ATAGTGAGTA TGGTGTGGAC GTCGTATTGC GGTTCTCTAT CCCCGTTAGG 
GGAACCGAGG AAGCGGCAAT GAAACTGCGT GATTTAAGCC GCGGTGCGTT GCATTTATTG 
CCGATTCCAT AA
 
Protein sequence
MQAYPIPAAP VSFSEEIKKS RFTTILAATP GIDAAKAFIQ HVREEHASAG HHCWAFVAGA 
PDDSQQLGFS DDGEPSGTAG KPMLSQLMGS GIGEITAVVV RYYGGIPLGT GGLVKAYGGG 
VQQALKLISL QEKVLQKEYG LQCDYALLPQ VESLIFQLGG KVLHSEYGVD VVLRFSIPVR 
GTEEAAMKLR DLSRGALHLL PIP