| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4032 |
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| Symbol | |
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| ID | 8135023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4552999 |
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| End bp | 4554645 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644867343 |
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| Product | acetolactate synthase 2 catalytic subunit |
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| Protein accession | YP_003019583 |
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| Protein GI | 253690393 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.965417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGGAG CTCAGTGGGT GGTACAAGCG TTGCGAGCAC AGGGAGTGGA CACCGTTTTT
GGGTATCCGG GTGGCGCGAT AATGCCCGTC TATGATGCAC TTTATGACGG CGGCGTTAAA
CACCTGCTGT GTCGCCATGA GCAAGGCGCG GCAATGGCGG CGATTGGTTA TGCCCGCGCT
ACAGGTAACG TGGGCGTTTG CATTGCGACG TCTGGCCCTG GTGCTACCAA CCTGATCACC
GGTTTAGCCG ATGCGCTGCT GGATTCTGTG CCTGTGGTGG CGATCACCGG ACAGGTTGGG
TCGGCGCTGA TTGGTACCGA TGCTTTTCAG GAAATCGACG TGTTGGGGCT GTCGCTGGCC
TGTACAAAAC ACAGCTTTCT GGTTGAGTCT CTCGAATCAC TGCCGGAAGT GATGGCAGAA
GCGTTTGCGA TTGCCAATAG CGGTCGCCCC GGCCCTGTTC TGGTCGATAT TCCTAAAGAT
ATTCAGCTGG CCGTGGGCGA TTTCACCCCG AACTTTGCGC CCGTTGCTAA TGATGTTGAT
TTCCCCGAGC AAGATATCAC GCAGGCATGT GCCCTGTTGG CGAAAGCACA AAAACCGGTA
CTGTACGTTG GTGGCGGAGT CGGCATGGCG AATGCGGTTC CGGCACTGCG CGAATTCCTG
AGTGTAACGG ATATCCCTTC CGTTTCGACG CTGAAAGGTT TGGGTGTCGT GGATGCCAAT
CATCCCTATT ACCTCGGTAT GATTGGTATG CACGGCACGA AGGCGGCGAA CCTGATTGTG
CAGGAATGCG ATCTGTTAAT CGCTGTCGGG GCGCGTTTTG ATGACCGCGT GACCGGCAAG
CTGAATGCCT TCGCGCCTCA TGCCAGCGTT ATTCACATGG ATATCGACCC AGCAGAATTG
AGCAAATTGC GCCATGCCAA TGTGGCGTTG CAAGGCGATC TGAAAACGAT ATTACCGGCG
CTGCAACAGC CGCTGAACGT CAGCGCGTGG CGTCAGCAGG CGACCATGAT GAAGGCAGAA
TACCCGTGGC GTTATGATCA TCCCGGTCAG GCGATTTATG CGCCTGCGCT GCTGAGAACG
ATCTCTGAGC GAATGGATGC GGATACCGTG GTGACGACCG ACGTCGGCCA GCACCAGATG
TGGGCTGCAC AACATATGAC GTTCAGCCGT CCTGAGAATT TCATTACTTC CAGCGGCCTT
GGCACAATGG GCTTCGGCGT GCCAGCGGCG GTGGGGGCAC AGGTTGCGCG CCCAGACGAC
ATGGTTATCT GCATTTCTGG CGACGGTTCT TTCATGATGA ACGTTCAGGA ACTGGGCACC
ATCAAACGAA AACGGCTGCC GTTGAAGATC GTGCTGTTGG ATAACCAACG GTTAGGCATG
GTACGTCAGT GGCAGCAGTT ATTCTTTGAT GAACGCTATA GTGAAACCGA CCTCTCCGAT
AACCCTGATT TCCTGACGCT GGCGAGTGCG TTTGATATCC CCGGCCAGCG CATCACCCGT
AAAGATCAAA TTGATGTCGC GCTGGATGCC ATGTTTAACA GCGAAGGACC CTATTTACTG
CACGTATCTA TCGATGAATA TGAAAACGTC TGGCCACTGG TTCCGCCGGG TGCGGGTAAC
GAAACGATGC TCGATAAAAC CGAATAG
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| Protein sequence | MNGAQWVVQA LRAQGVDTVF GYPGGAIMPV YDALYDGGVK HLLCRHEQGA AMAAIGYARA
TGNVGVCIAT SGPGATNLIT GLADALLDSV PVVAITGQVG SALIGTDAFQ EIDVLGLSLA
CTKHSFLVES LESLPEVMAE AFAIANSGRP GPVLVDIPKD IQLAVGDFTP NFAPVANDVD
FPEQDITQAC ALLAKAQKPV LYVGGGVGMA NAVPALREFL SVTDIPSVST LKGLGVVDAN
HPYYLGMIGM HGTKAANLIV QECDLLIAVG ARFDDRVTGK LNAFAPHASV IHMDIDPAEL
SKLRHANVAL QGDLKTILPA LQQPLNVSAW RQQATMMKAE YPWRYDHPGQ AIYAPALLRT
ISERMDADTV VTTDVGQHQM WAAQHMTFSR PENFITSSGL GTMGFGVPAA VGAQVARPDD
MVICISGDGS FMMNVQELGT IKRKRLPLKI VLLDNQRLGM VRQWQQLFFD ERYSETDLSD
NPDFLTLASA FDIPGQRITR KDQIDVALDA MFNSEGPYLL HVSIDEYENV WPLVPPGAGN
ETMLDKTE
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