Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4030 |
Symbol | |
ID | 8135021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4551728 |
End bp | 4552654 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644867341 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_003019581 |
Protein GI | 253690391 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.597878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAA AAGCGGATTA CATTTGGTTC AATGGCGAAA TGGTTCCATG GGCTGAAGCA AAAGTACACG TGATGTCGCA CGCTTTGCAT TATGGTACCT CCGTGTTTGA GGGCGTTCGT TGCTACAATT CACACAAAGG TCCGGTGGTT TTTCGTCACC GCGAGCACAT GCAGCGCCTG CGTGATTCGG CAAAAATTTA CCGTATGCCA GTCGCGCAGA GTGTGGATGA ACTGATGGAA GCCTGTCGTG AAACGCTGCG TAAAAATAAT CTGACCAGTG CGTATATCCG CCCGTTGGTG TTCATTGGCG ATGTGGGGAT GGGGGTTAAC CCACCAGACG GTTACCAAAC TGATGTGATT ATCGCGGCCT TTCCGTGGGG CGCGTACCTG GGTGAAGAAG CGCTGGAAGC GGGCATTGAT GCGATGGTGT CGTCCTGGAA TCGCGTTGCG GCGAATACCA TTCCAACCGC CGCTAAAGCG GGTGGCAATT ATCTATCCTC CCTGCTGGTG GGCAGCGAAG CACGTCGCCA CGGCTATCAG GAAGGGATTG CACTGGATGT CCACGGCTAT GTTTCTGAAG GCGCGGGCGA GAACCTGTTT GAAGTGAAGG ACGGTATTAT CTTCACACCG CCGTTTACCT CTTCGGCGCT GCCGGGCATT ACGCGTGATG CCATCATCAA GCTGGCGAAG GACGCGGGAT ATGAAGTGCG TGAGCAGGTG CTGTCCCGCG AGTCACTGTA TCTGGCGGAT GAAGTGTTTA TGTCCGGCAC GGCGGCGGAA ATTACCCCAG TGCGTAGCGT AGACGGTATT CAGGTCGGCA TCGGCAAACG CGGCCCGGTC ACCAAAGCCT TGCAGGAGGC GTTCTTTGGC CTCTTCACGG GTGAAACCGA AGATAAATGG GGCTGGTTGG ATCCGATAAA TCAGTAA
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Protein sequence | MTKKADYIWF NGEMVPWAEA KVHVMSHALH YGTSVFEGVR CYNSHKGPVV FRHREHMQRL RDSAKIYRMP VAQSVDELME ACRETLRKNN LTSAYIRPLV FIGDVGMGVN PPDGYQTDVI IAAFPWGAYL GEEALEAGID AMVSSWNRVA ANTIPTAAKA GGNYLSSLLV GSEARRHGYQ EGIALDVHGY VSEGAGENLF EVKDGIIFTP PFTSSALPGI TRDAIIKLAK DAGYEVREQV LSRESLYLAD EVFMSGTAAE ITPVRSVDGI QVGIGKRGPV TKALQEAFFG LFTGETEDKW GWLDPINQ
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