Gene PC1_4029 details

Gene Information

• Locus tag: PC1_4029
• ID: 8135020
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: -
• Start bp: 4549804
• End bp: 4551654
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644867340
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_003019580
• Protein GI: 253690390
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.451048
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTAAGT ACCGTTCAGC CACCACCACG CACGGCCGTA ATATGGCCGG CGCCCGAGCC 
TTGTGGCGCG CCACCGGGAT GACCGACAAT GATTTTGGTA AACCCATTAT CGCCGTGGTC 
AACTCCTTCA CCCAATTCGT GCCCGGCCAT GTGCACTTGC GCGATCTGGG TAAACTGGTT 
GCCGAGCAAA TCGAAGCTTC TGGTGGTGTC GCGAAAGAAT TCAACACGAT CGCAGTGGAC 
GACGGCATCG CGATGGGCCA TGGCGGTATG CTCTATTCTC TGCCTTCCCG TGAACTGATT 
GCCGACTCGG TGGAATACAT GGTGAATGCC CACTGCGCGG ATGCGATGGT GTGTATCTCC 
AACTGCGACA AAATCACCCC GGGGATGCTG ATGGCGTCGC TGCGCCTGAA TATCCCGGTG 
ATTTTCGTGT CTGGTGGCCC GATGGAAGCG GGAAAAACCA AATTATCCGA TCAGATCATC 
AAGCTGGATC TGGTGGATGC CATGATTCAG GGCGCGGACC CGAAAGTCTC CGATGAACAG 
AGCGAACAGG TGGAGCGTTC TGCCTGTCCG ACCTGTGGTT CCTGTTCCGG TATGTTTACC 
GCTAACTCCA TGAACTGCCT GACCGAAGCG CTGGGTCTGT CTCAGCCGGG CAACGGCTCT 
CTGCTAGCGA CGCACGCCGA CCGTAAGCAG CTGTTCCTGA ACGCAGGCAA ACGCATTGTC 
GGTCTGGCGA AGCGTTACTA CGAGCAGGAT GATGAGAGCG TGCTGCCGCG CAACATCGCC 
AATAAAGCCG CATTTGAAAA CGCCATGATT CTGGATATCG CGATGGGGGG TTCCACCAAT 
ACCGTTCTGC ATCTGCTAGC CGCGGCGCAG GAAGGTGAAG TGGACTTCAC CATGACCGAC 
ATCGACAGAC TGTCACGTCA GGTTCCGCAC CTGTGTAAGG TGGCACCGAG TACGCAGAAA 
TACCACATGG AAGACGTACA CCGCGCGGGT GGTGTGATCG GTATTCTGGG CGAGCTGGAC 
AGAGCTGGTC TGCTGAACCG TGAAGTGAAC AACGTGCTGG GCAAAACGCT GCCGGAAACA 
CTGGAAGCCT ACGACGTCAT GCTGACGCAG GATGACAGTG TGAAAAGCAT GTATTCCGCC 
GGTCCGGCGG GTATCCGCAC CACGCAGGCG TTTTCGCAGG ATTGCCGCTG GGATTCACTG 
GATACCGATC GTCAGGAAGG CTGTATTCGT TCCCGCGAAT TTGCCTACAG TCAGGATGGC 
GGTCTGGCCG TGCTGTACGG CAATCTGGCA GAGAATGGCT GTATCGTGAA AACCGCAGGC 
GTGGATGAAG GTAGTCTGGT CTTCCGCGGT CCGGCAAAAG TTTATGAAAG TCAGGATGAT 
GCGGTAGACG CCATTCTGGG CGGTAAGGTC GTGGCGGGCG ACGTGGTTGT GATCCGTTAC 
GAAGGGCCGA AAGGCGGGCC GGGTATGCAG GAAATGCTGT ATCCAACCAC CTACCTGAAA 
TCGATGGGGC TGGGTAAAAG CTGTGCGCTG ATCACTGACG GACGCTTCTC CGGCGGTACT 
TCTGGCCTGT CTATCGGCCA TGCGTCTCCT GAAGCAGCCA GCGGCGGCAC TATTGCACTG 
GTACAGGACG GTGACATCAT CGCGATTGAT ATTCCGAACC GCAGCATTGC GCTGGTTCTG 
GATGACAATG CGTTAGCAAG CCGCCGCGCA GCGGAAGAAG CGAGAGGCGA TCAGGCCTGG 
ACGCCGCACA ATCGTGAACG TCAGGTTTCT TTTGCGCTGC GCGCGTACGC CAGCCTGGCA 
ACCAGCGCGG ATAAAGGCGC GGTGCGGGAC AAAAGCAAGC TGGGAGGCTA A 

 

Protein sequence

MPKYRSATTT HGRNMAGARA LWRATGMTDN DFGKPIIAVV NSFTQFVPGH VHLRDLGKLV 
AEQIEASGGV AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS 
NCDKITPGML MASLRLNIPV IFVSGGPMEA GKTKLSDQII KLDLVDAMIQ GADPKVSDEQ 
SEQVERSACP TCGSCSGMFT ANSMNCLTEA LGLSQPGNGS LLATHADRKQ LFLNAGKRIV 
GLAKRYYEQD DESVLPRNIA NKAAFENAMI LDIAMGGSTN TVLHLLAAAQ EGEVDFTMTD 
IDRLSRQVPH LCKVAPSTQK YHMEDVHRAG GVIGILGELD RAGLLNREVN NVLGKTLPET 
LEAYDVMLTQ DDSVKSMYSA GPAGIRTTQA FSQDCRWDSL DTDRQEGCIR SREFAYSQDG 
GLAVLYGNLA ENGCIVKTAG VDEGSLVFRG PAKVYESQDD AVDAILGGKV VAGDVVVIRY 
EGPKGGPGMQ EMLYPTTYLK SMGLGKSCAL ITDGRFSGGT SGLSIGHASP EAASGGTIAL 
VQDGDIIAID IPNRSIALVL DDNALASRRA AEEARGDQAW TPHNRERQVS FALRAYASLA 
TSADKGAVRD KSKLGG