| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4018 |
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| Symbol | |
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| ID | 8135009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4538578 |
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| End bp | 4540062 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644867329 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_003019569 |
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| Protein GI | 253690379 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATAA GCACACCTAT GTTGGTGACG TTTCTGGTGT ATATTTTCGG GATGGTTCTC
ATCGGCCTGT TTGCCTATCG CGCAACGAAT AATTTTGGCG ATTACATTCT GGGCGGACGT
CGGATGGGCA GTGTGGTGAC TGCACTGTCG GCAGGCGCTT CCGATATGAG CGGCTGGCTG
CTCATGGGGT TACCGGGTGC CATTTTCATT TCCGGGATCT CGGAAAGCTG GATCGCGATC
GGCCTGACGT TAGGCGCCTA CCTGAACTGG AAATGGGTCG CCGGACGCCT GCGCGTACAC
ACTGAGGTCA ACCACAACGC GCTTACCCTT CCTGACTATT TCACCCACCG CTTTGAAGAT
AACAGCAAAT TACTGCGTGT AATTTCCGCG TTAGTGATCC TGATTTTCTT CACCATTTAT
TGTGCATCCG GCGTGGTTGC GGGAGCTCGT CTGTTTGAAA GCACCTTTGG CATGAGCTAC
GAAACCGCGT TATGGGCAGG GGCAACAGCC ACCATTGCCT ATACCTTTAT CGGCGGCTTT
CTGGCCGTGA GTTGGACGGA CACCGTTCAG GCCACCCTGA TGATTTTCGC CCTGATCCTG
ACCCCCGTGA TGGTCATTTT ATCACTGGGA GGGATAGACA CCTCACTCAT GGTGATTGAG
GCAAAAAATC CGGCCAATAT GGATATGTTC AAAGGGCTGA ATTTTGTCGC CATCATCTCG
CTGATGGGTT GGGGTCTGGG CTATTTTGGT CAACCGCACA TTCTGGCGCG TTTTATGGCC
GCCGATTCAC ACCACACGAT CCACAGTGCA CGCCGCATCA GCATGACCTG GATGATTCTG
TGTCTTGCCG GTGCCGTGAC GGTGGGCTTC TTCGGCATCG CCTACTTCCA TAACAACCCA
GATCAGGCCG GTAGCGTGAC GCAAAACAGC GAGCGTGTCT TTATCGAGCT GTCGATGTTG
CTGTTCAATC CGTGGATTGC CGGCGTGCTG CTGTCTGCGA TTCTGGCCGC CGTGATGAGT
ACGCTGAGTT GCCAGTTGCT GGTGTGCTCC AGCGCCATCA CCGAAGATTT ATACAAGCCA
TTCCTGCGCA AGAATGCCAG CCAGAAAGAG CTGGTGTGGG TGGGGCGCGC CATGGTACTG
CTCGTCGCTA TCATCGCTAT CGCGCTGTCG CTTAATCCTG AAAACCGCGT ACTGGGTCTG
GTGAGCTATG CCTGGGCTGG TTTCGGCGCC GCATTCGGTC CGGTGATTTT GATTTCTCTG
CTGTGGCCGC GCATGACGCG TAACGGTGCA CTACTCGGTA TGATCGTGGG CGCAGCAACC
GTGCTGATCT GGAAGCAGTA CGCCTGGCTG GGTCTGTATG AAATTATCCC TGGTTTCATC
TTCAACAGCC TGACCATTTT TATTGTCAGC CTGCTGGGTA AAGCGCCATC AAAAGCGATT
ACCGACCGCT TCAATCAGGC GGAAGCGGAA TACCAATCCG TTTAA
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| Protein sequence | MTISTPMLVT FLVYIFGMVL IGLFAYRATN NFGDYILGGR RMGSVVTALS AGASDMSGWL
LMGLPGAIFI SGISESWIAI GLTLGAYLNW KWVAGRLRVH TEVNHNALTL PDYFTHRFED
NSKLLRVISA LVILIFFTIY CASGVVAGAR LFESTFGMSY ETALWAGATA TIAYTFIGGF
LAVSWTDTVQ ATLMIFALIL TPVMVILSLG GIDTSLMVIE AKNPANMDMF KGLNFVAIIS
LMGWGLGYFG QPHILARFMA ADSHHTIHSA RRISMTWMIL CLAGAVTVGF FGIAYFHNNP
DQAGSVTQNS ERVFIELSML LFNPWIAGVL LSAILAAVMS TLSCQLLVCS SAITEDLYKP
FLRKNASQKE LVWVGRAMVL LVAIIAIALS LNPENRVLGL VSYAWAGFGA AFGPVILISL
LWPRMTRNGA LLGMIVGAAT VLIWKQYAWL GLYEIIPGFI FNSLTIFIVS LLGKAPSKAI
TDRFNQAEAE YQSV
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