| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4017 |
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| Symbol | putA |
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| ID | 8135008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4534413 |
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| End bp | 4538381 |
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| Gene Length | 3969 bp |
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| Protein Length | 1322 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644867328 |
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| Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_003019568 |
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| Protein GI | 253690378 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.77127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTCTA CCACGATGGG TGTAAAACTC GATGAGGAAA CGCGCGAACG CATCAAGGCT
GCAGCACAGC GAATTGATCG TACACCGCAC TGGCTGATCA AACAGGCTAT TTTCCATTAC
CTCGAACGCC TCGAAAGTGG CCTCGACACT CCTGAAACAC CGCAATGGGC GAACGTCAGC
CACATTGAAG CGGAAGAGAT TATGCCGCAA TCTCGGGAAG AAGAAACCCA CCAACCCTTC
CTTGATTTCG CTGAGCAGGT CCTTCCCCAG TCAGTTACCC GCGCAGCCAT CACTTCTGCT
TATCGCCGAC CCGAAAATGA ATTAGTACCT ATCTTACTTG AACAGGCAAG ACTTACCGAT
GAAATGTCGG CATTAACGCA GCAACTGGCT TATCGACTGA CAGAGAAATT ACGTAGCCAG
AAAGCCGGGA GCGGGCGTGC TGGCATTGTG CAAGGACTGC TACAGGAATT CTCACTTTCT
TCTCAGGAAG GGGTGGCGCT GATGTGTTTA GCTGAAGCGC TGCTGCGTAT TCCTGATAAA
TCTACGCGCG ATGCTCTGAT CCGCGACAAA ATCAGCCGAG GAAACTGGCA GGCGCATCTT
GGTCACAGCC CGTCGCTCTT TGTGAATGCC GCAACCTGGG GACTATTGTT TACCGGAAAG
CTTGTGGCGA CACACAACGA GGCGCTCCTG TCGAATTCTC TGAACCGCAT GATCGGGAAA
AGCGGCGAGC CGCTCATCCG CAAAGGCGTT GATATGGCCA TGCGGCTGAT GGGGGAGCAG
TTTGTTACTG GCGAAACCAT CGGTGAGGCG CTGGCGAATG CCCGTGAGCG AGAGGAAAAA
GGCTTCCGTT ACTCTTACGA TATGTTAGGT GAAGCGGCGC TGACGGAACA CGATGCTGCC
GCGTATCTGG CGGCCTATCA GCAGGCGATT CATGCTATCG GCAAAGCCTC GAACGGGCGC
GGGATTTACG AAGGGCCGGG CATCTCTATC AAGCTATCGG CGCTGCATCC TCGCTATAGC
CGGACACAGT ACGACCGCGT GATGGAAGAA CTCTACCCGC GTTTGTTGAC GCTAACGCTG
CTGGCGCGCC AGTACGATAT CGGCATCAAT ATTGATGCGG AGGAAGCAGA TCGACTGGAG
ATCTCACTCG ATCTGCTGGA AAAACTCTGC ATGGAACCGC AGCTGGCGGG ATGGAATGGC
ATCGGGTTTG TCATTCAGGC GTATCAGAAA CGCTGCCCGT ATGTGATCGA TGCGCTGATT
GAATTGGCAC AGCGCAGCCG TCGTCGGCTG ATGATTCGTC TGGTGAAAGG TGCGTACTGG
GATAGCGAAA TTAAACGGGC ACAGGTTGAC GGGCTGGAGG GCTACCCGGT CTACACGCGT
AAAGTCTATA CCGATGTGTC TTATCTGGCG TGTGCCCGTA AGCTGCTGGC CGTACCGAAT
CTGATTTATC CGCAGTTCGC CACGCACAAT GCGCAGACGC TAAGCGCGAT CTACCACATG
GCGGGCAACA ATTACTATCC CGGTCAGTAT GAGTTTCAGT GCCTGCACGG CATGGGGGAA
CCGCTCTATG ATCAGGTGGT TGGCGCGGTT GCGGACGGTA AATTGAACCG ACCGTGCCGT
ATTTATGCCC CGGTTGGCAC CCATGAAACG CTGCTGGCTT ATCTGGTGCG ACGCTTGTTG
GAAAACGGCG CGAATACTTC ATTTGTTAAC CGCATCGCGG ATACCTCAAT GCCGCTGGAA
ACGCTGATTG CCGATCCGAT TCGCGGTGTA GAAGCGCTGG CAAAAGTGGA ATGGAGTATG
GGCGCACCGC ATCCCCGCAT TCCCCTGCCG CGTCAGCTAT ATGGTCGAGA GCGGCAGAAT
TCGAGCGGGT TGGATCTCTC GAACGAGCAC CGGCTGGCTT CGCTCTCCAG CACGTTGCTT
AGTCACGCGC TTCTGCCGTG GTATGCCGTA CCGATGCTTG GGGGAGAAAG CGTGGCGAGT
GAAGAAAAGC CCGTGGTGAA TCCTGCCGAT GTGCACGATG TGGTGGGCTA TGTTCGCGAT
GCCTCCGTGG CGGATGTTGA ACTGGCGATA GAAACGGCGG TACATGCTGG CACCATCTGG
TTTGCGACGC CACCTGCGGA GCGTGCTGCG ATACTGAATC AGGCCGCCTC GCTGATGGAA
AGTCAGTTAC AGAGCCTGCT GGGCTTGCTG GTGCGGGAAG CGGGGAAATC CTTCAGTAAC
GCGATTGCGG AAGTGCGTGA AGCGGTGGAC TTCTTGCGCT ATTACGCGGG GCAGGTGCGG
GATACGTTCA CTAATGATAC CCATCGTCCG CTGGGGCCGG TGGTTTGCAT CAGCCCGTGG
AATTTCCCGC TGGCGATCTT CACCGGACAA ATCTCTGCTG CACTGGCGGC GGGAAATAGC
GTATTAGCGA AGCCAGCTGA ACAGACGCCG CTGATTGCGG CACAGGCAGT ACGTATTTTA
CGTGAGGCGG GTGTCCCTCA GGGCGTGCTG CAACTGTTGC CTGGTCAGGG AGAAACGATT
GGCGCAGCGT TGGTCGGCGA TGAACGGGTA CGCGGCGTGG TATTTACCGG ATCGACGGCC
GTTGCCAAAA CGCTGCAACG CAGCATCGCT GGCAGGCTCG ATCCACAGGG GCGTTTGACA
CCGCTGATTG CCGAAACCGG CGGCCTGAAT GCGATGATTG TCGATTCCTC TGCACTGACG
GAACAGGTGG TGAATGACGT TATCGCTTCT GCGTTCGATA GCGCCGGACA GCGTTGCTCA
GCGCTGCGTC TTTTGTGTCT GCAAGACGAT ATTGCGGATC GCACTCTGGC TATGCTGCGG
GGCGCGATGG CGGAGTGCCG AATGGGGAAT CCTGAACGCT TATCAACCGA TATCGGCCCG
CTGATTGATG CGGAGGCGAA AGAGAATGTG GAACTGCATA TTCAGACGAT GCGGGCGAAA
GGCCATACCG TGTTTCAGGC CGCGTATCCA CAGGATGAAG AGACATGGCG GCACGGGACG
TTTGTGAAGC CGACGCTGAT CGAACTGGGC AATATAGGCG AGCTGAAAAA AGAAGTTTTT
GGTCCAGTTT TACACGTTGT TCGCTATCAA AGCCAGCAGT TGGATACCGT GATTGAGCAA
ATCAACGCGG CAGGATTCGG CCTGACGCTG GGCGTGCATA CCCGCATTGA TGAAACCATC
CAGCGTGTGA CAGGCAAGGC GAGGGTGGGC AACCAATATG TGAACCGTAA TATGGTCGGC
GCCGTTGTCG GGGTTCAGCC GTTTGGCGGT GAAGGCTTAT CGGGAACCGG ACCAAAGGCA
GGTGGGCCGC TTTATCTGTA CCGCTTGCTG GCTCATCGGC CGGACGATGC GCTCGCGGCA
GGATTTGCGC AGCAGGATCG TGAGCCGTCT CCCGATATTT CTACCCGAAC GTCGCTGCTG
GCGGGGCTTC AGGTGCTGGA AAGATGGGCG ATTGCCGGGG AACGTCACGG TCTGGCGACG
CTGTGCCAGC GTTATAGAGA AGATAGCGTC AGCGGGATAA CGCGACAGCT GCCGGGCCCG
ACAGGAGAAA GCAATAGCTA TACGTTGTTG CCGCGTGAAC GGATTTTGTG TCTGGCGGAT
AACGAGGAAG ATCGCTTGAT TCAGACGGCG GTGGTGCTGG CAATCGGTGG GCAACTGCTG
TGGCTGGAAG GTGAACAGGA GAAAACGCTC TATGACCGAT TACCCACAGA AGTGCAGTCG
CATATTCAGT TCACGCCTGA CTGGCAGCGG GACGATGTGT CTTTTCATGG CGTCATTTAT
CACGGAGACG CCGATCGGTT ACGGCTGTTG AGTAAAATGC TTGCCGAACG AGACGGTCCG
ATTATCCTGC CGTTGGGCTA CGCGCAGGGG GATACCCACG TTCAGCTTGA ACGTCTGCTG
AATGAACGTT CTCTGAGTAT TAATACCGCG GCAGCGGGGG GAAATGCGAG TCTGATGACA
ATAGGCTAA
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| Protein sequence | MGSTTMGVKL DEETRERIKA AAQRIDRTPH WLIKQAIFHY LERLESGLDT PETPQWANVS
HIEAEEIMPQ SREEETHQPF LDFAEQVLPQ SVTRAAITSA YRRPENELVP ILLEQARLTD
EMSALTQQLA YRLTEKLRSQ KAGSGRAGIV QGLLQEFSLS SQEGVALMCL AEALLRIPDK
STRDALIRDK ISRGNWQAHL GHSPSLFVNA ATWGLLFTGK LVATHNEALL SNSLNRMIGK
SGEPLIRKGV DMAMRLMGEQ FVTGETIGEA LANAREREEK GFRYSYDMLG EAALTEHDAA
AYLAAYQQAI HAIGKASNGR GIYEGPGISI KLSALHPRYS RTQYDRVMEE LYPRLLTLTL
LARQYDIGIN IDAEEADRLE ISLDLLEKLC MEPQLAGWNG IGFVIQAYQK RCPYVIDALI
ELAQRSRRRL MIRLVKGAYW DSEIKRAQVD GLEGYPVYTR KVYTDVSYLA CARKLLAVPN
LIYPQFATHN AQTLSAIYHM AGNNYYPGQY EFQCLHGMGE PLYDQVVGAV ADGKLNRPCR
IYAPVGTHET LLAYLVRRLL ENGANTSFVN RIADTSMPLE TLIADPIRGV EALAKVEWSM
GAPHPRIPLP RQLYGRERQN SSGLDLSNEH RLASLSSTLL SHALLPWYAV PMLGGESVAS
EEKPVVNPAD VHDVVGYVRD ASVADVELAI ETAVHAGTIW FATPPAERAA ILNQAASLME
SQLQSLLGLL VREAGKSFSN AIAEVREAVD FLRYYAGQVR DTFTNDTHRP LGPVVCISPW
NFPLAIFTGQ ISAALAAGNS VLAKPAEQTP LIAAQAVRIL REAGVPQGVL QLLPGQGETI
GAALVGDERV RGVVFTGSTA VAKTLQRSIA GRLDPQGRLT PLIAETGGLN AMIVDSSALT
EQVVNDVIAS AFDSAGQRCS ALRLLCLQDD IADRTLAMLR GAMAECRMGN PERLSTDIGP
LIDAEAKENV ELHIQTMRAK GHTVFQAAYP QDEETWRHGT FVKPTLIELG NIGELKKEVF
GPVLHVVRYQ SQQLDTVIEQ INAAGFGLTL GVHTRIDETI QRVTGKARVG NQYVNRNMVG
AVVGVQPFGG EGLSGTGPKA GGPLYLYRLL AHRPDDALAA GFAQQDREPS PDISTRTSLL
AGLQVLERWA IAGERHGLAT LCQRYREDSV SGITRQLPGP TGESNSYTLL PRERILCLAD
NEEDRLIQTA VVLAIGGQLL WLEGEQEKTL YDRLPTEVQS HIQFTPDWQR DDVSFHGVIY
HGDADRLRLL SKMLAERDGP IILPLGYAQG DTHVQLERLL NERSLSINTA AAGGNASLMT
IG
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