Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4010 |
Symbol | |
ID | 8135001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4525569 |
End bp | 4526651 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644867321 |
Product | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
Protein accession | YP_003019561 |
Protein GI | 253690371 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | [TIGR02380] undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTACCG AATTACTATT TATTTTCTTA TTTTCTCTGG GCTTTCTTTT TTTTGCTCGC AGCATCGCGG GTAAAATAGG GCTTGTCGAT CGTCCCAACT ACCGTAAACG CCATCGGGGT CTTGTGCCTT TGGTTGGCGG TATTTCTGTG TATGCGGGTA TCTGCTTTAC CTACTTTATT ACCGACCAAT ATATCCCCAA CTTCCGTCTT TACCTGCTGT GCGCGGGCGT GCTGGTGTTC GTCGGCATGC TGGACGATCG TTTTGATGTC AGTGTGAAAA TTCGTGCCGT TGTCCAGGCG TTTGTCGCGG TGGTGATGAT GGCCTTTGCC GGCTTGACGC TACACAATCT GGGACACATT TTCGGACCAT GGCAGATGGC GCTGGGACCG TTTGGTTATC TGGTCACGCT GTTTGCCGTC TGGGCTGCGA TTAATGCGTT CAATATGGTG GACGGTATCG ATGGGTTACT CGGCGGCTTG TCCAGTGTCT CGTTTGGGGC GATGGGGATT TTGCTGTATC TGAGCGGCCA TACGAATCTG GCATTGTGGT GTTTTGCCAT GATTGCGGCG ACGCTGCCTT ATATTTTGCT TAATCTCGGT ATCTTTGGGC GACGCTACAA GGTTTTCATG GGTGATGCGG GCAGCACGAT GATTGGCTTC ACGGCTATCT GGATCCTGAT TCAAACGACA CAAGGCCCAC AGCATCCGAT TAATCCGGTA ACGGCATTGT GGATCATCGC TATCCCGCTG ATTGATATGA TCGCCATTAT GTATCGGCGC TTACGCAAAG GGATGAGCCC GTTCTCACCT GACCGACAGC ACATTCATCA TTTAATGATG CGGGCGGGTT TTTCTTCCCG CCAGGCATTT GTGCTGATTA CGCTTGCTGC CGCCTTGTTG GCTGCGGTCG GCGTGTTGGG AGAATATTTC TTTTTTATAC CCGAATGGTT GATGTTGGCA TTATTCTTGC TTGCATTTCT ACTGTATGGC TACTGCCTGA AACGAGCATG GCGGGTCGCC CGTTTTATCA AGCGAATCAA ACGCCGTATG CGGCATTCCG ATGAGCAAAA GCAGTCATCC TGA
|
Protein sequence | MSTELLFIFL FSLGFLFFAR SIAGKIGLVD RPNYRKRHRG LVPLVGGISV YAGICFTYFI TDQYIPNFRL YLLCAGVLVF VGMLDDRFDV SVKIRAVVQA FVAVVMMAFA GLTLHNLGHI FGPWQMALGP FGYLVTLFAV WAAINAFNMV DGIDGLLGGL SSVSFGAMGI LLYLSGHTNL ALWCFAMIAA TLPYILLNLG IFGRRYKVFM GDAGSTMIGF TAIWILIQTT QGPQHPINPV TALWIIAIPL IDMIAIMYRR LRKGMSPFSP DRQHIHHLMM RAGFSSRQAF VLITLAAALL AAVGVLGEYF FFIPEWLMLA LFLLAFLLYG YCLKRAWRVA RFIKRIKRRM RHSDEQKQSS
|
| |