Gene PC1_3984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3984 
Symbol 
ID8134971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4495698 
End bp4496348 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content55% 
IMG OID644867291 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003019535 
Protein GI253690345 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAA CACTTAACGA CAAAGCACGG GAACTGTCGC CATTCGAGGT ACTGATTAAC 
GCGATAGAGA AAGGTGAGCT GCTGCCTGGT GAACGTTTGC AGGAAACACG GTTAGCGAAG 
CAGTTTGGAT TGAGCCGGAC GCCGATTCGT GAGGCGCTGC ACCGTCTGGA AGCGTTGGGG 
CTGGTGGAGC CGGGTCCACA GCGTGGACTG ATGATCGCGC AGATCAGCTA TGAGCGACTG 
CGTCAGCTTT TCGCCGTGCG TGAAGGGTTA GAGCGGCTGG CGATGGAGCT TGCTGTCGCT 
TCTGCGTCGG CAGAGGAGTT GGCGCTGCTG CAGGATATGG TCGACGTGGA GAAGACGCTC 
ACCGATAGCC GACAACTGCA CGATCATAAT CGGCTTTTTC ATCGCCAGAT TTACCGGGCG 
ACTCATAATC CGTATCTGAA TGAGATGCTG GAAAATCTGC GCATTCATCT GTCGCTCCTG 
CGCGGAACCA CTTATGAATC GACGGAACGT ACCGAAGAGG CGCGGCGTGA ACATCAGGCA 
ATTGTGGCAG CGTTGGTACG GCGTGATAAG GACGCGGCAC AAGAGGCTGC CTGCCAACAT 
ATCCGTAACG GCTATCGTGC CCGACTAAGC ATGTTAAATC AGCTGCTTTG A
 
Protein sequence
MNLTLNDKAR ELSPFEVLIN AIEKGELLPG ERLQETRLAK QFGLSRTPIR EALHRLEALG 
LVEPGPQRGL MIAQISYERL RQLFAVREGL ERLAMELAVA SASAEELALL QDMVDVEKTL 
TDSRQLHDHN RLFHRQIYRA THNPYLNEML ENLRIHLSLL RGTTYESTER TEEARREHQA 
IVAALVRRDK DAAQEAACQH IRNGYRARLS MLNQLL