| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3967 |
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| Symbol | |
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| ID | 8134954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4477028 |
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| End bp | 4477957 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644867274 |
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| Product | RarD protein, DMT superfamily transporter |
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| Protein accession | YP_003019518 |
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| Protein GI | 253690328 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.807001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCGC AACAAACCCG TGAGGGGATA TTTTTCGCCC TCGGTGCGTA TTTTATTTGG
GGAATTGCTC CCGTTTATTT CAAGCTGCTT GAGCACGTTC CACCCAATGA AATACTGACG
CACCGTATTA TCTGGTCATT CTTCTTTATG CTCATCCTGC TGACCATCGG CCGGAAATGG
CGTCAGGTGA GCTATGCCTG CCGCAACGTC AAGCATCTGT TTCTGCTGGC ATTAACGGCA
GTGCTTATCG GCGGAAACTG GCTGTTGTAC ATCTGGGCGG TCAACAACCA TCATATGCTG
GAAGCCAGTC TGGGGTACTT TATCAACCCG CTGGTCAACG TCATGTTGGG CATGATCTTC
CTTGGAGAGC GCTTCCGCCG TCTGCAATGG CTGGCCGTGC TGCTCGCGGT GACAGGCGTA
CTGGTTCAAC TGTGGACATT CGGATCGCTG CCGGTGATCG CCCTGGGGCT GGCATTCAGC
TTCGCGTTAT ACGGCCTGCT ACGTAAGAAG ATTGGTATCG ACGGGCAAAC TGGCATGTTG
ATCGAAACGC TGTGGCTGCT GCCAGTGGCG GTCATTTATC TGTTTTTTAT TGCCGATACG
CCAAGCAGCC ATCTGACAGC CAATCCCTGG TCGCTAAACC TGCTGCTGCT CTCGGCGGGT
ATCGTCACCA CGGTGCCGCT GCTATTTTTC ACCGCGGCGG CCATGCGTCT GCGTCTGTCA
ACGCTCGGCT TTTTCCAGTA TCTCGGCCCG ACCATCATGT TCCTGCTGGC TGTGGTGTTC
TACGGTGAAA CGTTCAGCAG CGACAAACTG GTCACGTTTG CCTTCATCTG GGGCGCACTG
GGGCTGTTCA TTCTGGATGC ACTTTATACA CAGCGTAAGC TACGGCGCAC GCCCGCTACA
CCTTCCCAGC CTCAACACGA CGGGAAATAA
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| Protein sequence | MNAQQTREGI FFALGAYFIW GIAPVYFKLL EHVPPNEILT HRIIWSFFFM LILLTIGRKW
RQVSYACRNV KHLFLLALTA VLIGGNWLLY IWAVNNHHML EASLGYFINP LVNVMLGMIF
LGERFRRLQW LAVLLAVTGV LVQLWTFGSL PVIALGLAFS FALYGLLRKK IGIDGQTGML
IETLWLLPVA VIYLFFIADT PSSHLTANPW SLNLLLLSAG IVTTVPLLFF TAAAMRLRLS
TLGFFQYLGP TIMFLLAVVF YGETFSSDKL VTFAFIWGAL GLFILDALYT QRKLRRTPAT
PSQPQHDGK
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