| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3930 |
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| Symbol | |
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| ID | 8134917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4429011 |
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| End bp | 4429844 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644867237 |
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| Product | intramembrane serine protease GlpG |
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| Protein accession | YP_003019481 |
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| Protein GI | 253690291 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACTC GCGTTATTGC TCTCTCCAAT CCGCGTCTGG CTCAGGCATT TGTTGATTAC
ATGCGTACGC AGCAGATCTA TTTGGAAATG CGGCCTCATG GGCATGAAGC TGAACTGTGG
CTGGAGGATG AAACCCAACT GGGCAAGGTT CAGGAAGCGC TGGAGATTTT TCTGCGTGAC
CCGACGAACC CGCGCTATCT GGCGGCCAGT TGGCAAACGG GATCGATGGA CACCGGTATT
CAATACCAAC GCTACTCTTT CCTGCAAACG CTGAAACAAA AGGCCGGACC GCTGACGCTA
TCCGTGATGG TTGTGACGAT CGCGGTGTTT ATCCTGATGC AGATTTCAGG CTATGAGAGC
GTGATGACGT GGCTGGCTTT CCCGGCGGAG GGGCAGCAGC TACAGCTGTG GCGCTGGTTC
AGTCATGCTT TGTTGCACTT TTCCCTGCTG CACATTTTGT TCAATCTGAT GTGGTGGTGG
TATCTGGGTG GGCCGGTTGA AAAAGTGTTG GGGACCGGCA AGCTGCTGGT CATCACGCTG
GTTTCCGCGC TGGTCAGCGG CTGGGCGCAG TCCTGGTTCA GCGGTACCTA TTTTGGTGGC
TTATCTGGCG TGGTTTACGC CTTGATGGGC TATGTCTGGC TGCGAGGGGA AAGAGAGCCT
GACGGCTATT TATCTATGCC GCGTAGTCTG ATGGCCTTCG CTTTACTCTG GCTGGTCGCC
GGATATTTCG ATATTTTAGG CATGTCGATC GCCAATGCGG CGCATGTGGC TGGGCTGATT
GTCGGGCTAT TGATGGCCTT TTGGGACACG TATAATAAAA CAAACCCCCG GTGA
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| Protein sequence | MMTRVIALSN PRLAQAFVDY MRTQQIYLEM RPHGHEAELW LEDETQLGKV QEALEIFLRD
PTNPRYLAAS WQTGSMDTGI QYQRYSFLQT LKQKAGPLTL SVMVVTIAVF ILMQISGYES
VMTWLAFPAE GQQLQLWRWF SHALLHFSLL HILFNLMWWW YLGGPVEKVL GTGKLLVITL
VSALVSGWAQ SWFSGTYFGG LSGVVYALMG YVWLRGEREP DGYLSMPRSL MAFALLWLVA
GYFDILGMSI ANAAHVAGLI VGLLMAFWDT YNKTNPR
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