| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3905 |
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| Symbol | |
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| ID | 8134892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4393046 |
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| End bp | 4395241 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644867212 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003019456 |
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| Protein GI | 253690266 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCA GGAAGAACTT CACTCCACCT ACCGGGAAAA CGTGTTTTCC TATTCCCTCC
GCGTTAGCCG TCGCCGTCAC GGCGGCCATG GCTGTGCTAA GCGGTATCGC GATACCCGCC
CTGGCTGAAA CGGGTGAGCG CGATGATTCC ACTATCGTGG TTGAAGCCAA AGACGCGGAA
GCCGTACAGG GGCTGGTGGC GGGCGGCATG TCGGCGCGTT CGTCCAGTAC CGGGCTGCTG
GGCAAAAAGG ATGTCATGGA TACGCCGTTT AACGTCAGCA ATGTGACCTC AGCGTTTATT
GAAAACAAGC AGGCACAAAC GCTGGGGCAG GTGGTTGCCC ATGACGCATC GGTGCGTGTG
AGTAGTTCTC AGGGCGGCCT GCTGGATTCT TATTACATTC GCGGTTTTCC ACTCAACGAA
GGAAACCTGA GCGACATCGC CATGAACGGC GTCTACGGTG TTGCCCCCAA CTATCAGCTG
ATGACCGACT ACATCGAGCG GGTGGAAGTG CTGAAAGGGC CGTCGGCGCT GCTGTATGGG
CTGTCGCCTA ATAGCAGCGT GGGCGGCGTG ATTAACGCCG TCACCAAACG CCCAACCACC
GTAGGCAATC TGACCCGCCT CACCACCAGC TGGCAGTCTG ATTCCCAACT CACGCAGCAT
GCGGATATTT CCCGCGTCTA TGCGCTGGAA AATAACAATC TGCTCGGCGT CCGTTTTAAT
GGCAATTATG GCTATGGCGA CACCGTGTGG AATGGCAGCG ACAAGCGCAC ACAGGTCGGC
GCGCTTGGGT TGGATTTCTC GTCAGAACGT TTCCGTGCCA CGTTGGATCT CATCACGCAG
CACCTGAAAA CCCGTGCGCC ATCGCGACCT TATTCGTTCG CGGCGGGAGT GACCGTACCC
GAGGCGCCGG ATGGCAACAC CAATATTTCC CAGCCGTGGG GCTTCTGGCA CTCCAAAGAT
CAGTCGGTGC TGCTGCATAC CGAATACGAT CTGGCGGATA ACGTCACCTG GTTTACCGAT
TTAGGCGGTT CCAGCGCACA CGTGAGCCGA CTGTCGGAGC AGGTGCCGCA GGTGATTAAT
AACAATGGTG ATATTCGTTC CGGCGTAGGG AATTATCGCT TTACCACCAG TCGTTACAAC
TTCGCGACCG GCGTTCGCGC GGATGTGGAA ACCGGAGCGG TGACGCACAA ACTGTCGGCA
CAGACCAGCT ACTATCGCGA TCGTCAGGCC AGCGCCAGCA GAGCGGGAAC GGCCATTGAT
TCAAATATTT ACAACCCTGT CTCTGCGCCA GCACAGGATA TCGCCGCGCC GTCGAGTATC
TACAAACGCT CTTCTACCGC GCTGTCAGGC ATCGCGCTGG CAGATACGCT CGGCTTCTGG
AACGATGCGC TGCAAGTCAC GGGTGGGCTG CGCTATCAGC AGATCAACTC GGATAACTTC
GCCGCGCCAG ATGGCGGGGC GCGCTCTTCT TATGACAAGA GCGCAATCAC CCCGATGCTC
GGGGTGATTG TTAAACCCTG GCAGCACGTC TCGCTCTATG CCAACTACAT TGAGGGGCTG
AGTAAAGGGG ACGTGGCACC CACGACGGCT AGCAATGCGG GGCAAGTGCT GTCGCCGTAT
AAGAGCAAGC AGTACGAAGC TGGGGTGAAA GTAGATGCGC TGGGGACGAT CTCCACGCTG
AGCGTTTTCC AGATCACCAA ACCGAGCGGT GCGCTGGTTA ACGGCACGTT TGTTGATGCC
AACGAACAGC GTAATCGGGG TATTGAACTG GATGTGGTCG GTTCACCGCT GGAAGACCTG
CGTCTGACGG GCGGCGTGAT GCTGCTGGAT GCCGAGTTGA CCAAAAGTGT GACGCCGGGG
GCGCAGGGCA AGCGTGCGCC GGGCACATCG CGTTTTCAGG CTAACGCCGG CGTGGAATAT
GACCTGCCGT TCCTGCGCGA TCTGACGCTG AGCGCCAACG TCACCCATAA CGGGAAGCAG
AACGTCAACA CCATCAATAC CCAATCCATT CCTTCCTGGA CCACAGTTGA TTTCGGCGCG
CGTTACAAGA CGCGAATCTA CAACGCGCCC ACCACGTTCC GCGCGGATGT CCTTAACGCC
TTTGACCGCA ATTACTGGTC TGGCGTGACG TCGTTCAGCA CGGTATCGCA AGGAACGCCG
CGGACGCTGA TGCTGTCTGT GGCGGTTGAT TTCTAA
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| Protein sequence | MNARKNFTPP TGKTCFPIPS ALAVAVTAAM AVLSGIAIPA LAETGERDDS TIVVEAKDAE
AVQGLVAGGM SARSSSTGLL GKKDVMDTPF NVSNVTSAFI ENKQAQTLGQ VVAHDASVRV
SSSQGGLLDS YYIRGFPLNE GNLSDIAMNG VYGVAPNYQL MTDYIERVEV LKGPSALLYG
LSPNSSVGGV INAVTKRPTT VGNLTRLTTS WQSDSQLTQH ADISRVYALE NNNLLGVRFN
GNYGYGDTVW NGSDKRTQVG ALGLDFSSER FRATLDLITQ HLKTRAPSRP YSFAAGVTVP
EAPDGNTNIS QPWGFWHSKD QSVLLHTEYD LADNVTWFTD LGGSSAHVSR LSEQVPQVIN
NNGDIRSGVG NYRFTTSRYN FATGVRADVE TGAVTHKLSA QTSYYRDRQA SASRAGTAID
SNIYNPVSAP AQDIAAPSSI YKRSSTALSG IALADTLGFW NDALQVTGGL RYQQINSDNF
AAPDGGARSS YDKSAITPML GVIVKPWQHV SLYANYIEGL SKGDVAPTTA SNAGQVLSPY
KSKQYEAGVK VDALGTISTL SVFQITKPSG ALVNGTFVDA NEQRNRGIEL DVVGSPLEDL
RLTGGVMLLD AELTKSVTPG AQGKRAPGTS RFQANAGVEY DLPFLRDLTL SANVTHNGKQ
NVNTINTQSI PSWTTVDFGA RYKTRIYNAP TTFRADVLNA FDRNYWSGVT SFSTVSQGTP
RTLMLSVAVD F
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