| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3898 |
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| Symbol | ompR |
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| ID | 8134885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4385404 |
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| End bp | 4386123 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644867205 |
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| Product | osmolarity response regulator |
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| Protein accession | YP_003019449 |
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| Protein GI | 253690259 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAAA ACTATAAAAT TCTGGTTGTA GATGACGACA TGCGGTTGCG TGCGCTATTA
GAGCGTTATC TGACTGAGCA GGGTTTTCAG GTACGTAGCG TAGCCAATGC TGAACAGATG
GACCGTTTGC TGACCCGTGA ATCCTTTCAC CTCATGGTGC TGGATCTGAT GCTGCCGGGC
GAAGATGGTT TGTCCATCTG CCGTCGTTTG CGTAGCCAGA GTAACCCGAT GCCGATCATT
ATGGTGACGG CCAAAGGGGA AGAAGTCGAT CGTATCGTCG GGCTGGAAAT CGGCGCGGAC
GATTATATTC CTAAACCTTT CAACCCGCGC GAACTGCTGG CTCGCATCCG TGCGGTGCTG
CGTCGTCAGG CGAATGAACT GCCGGGCGCG CCGTCGCAGG AAGAAGCGAT TATCGCGTTT
GGTAAATTCA AGCTGAATCT GGGCACGCGC GAAATGTTCC GCGATGATGA ACCGATGCCG
TTGACCAGCG GCGAGTTTGC CGTGCTTAAG GCGCTGGTGA GCCACCCGCG TGAGCCGCTG
TCTCGCGATA AGCTGATGAA TCTGGCCCGT GGCCGTGAAT ACAGTGCGAT GGAACGTTCT
ATCGACGTAC AAATTTCTCG TCTGCGCCGC ATGGTGGAAG AGGATCCGGC GCACCCGCGC
TATATCCAGA CCGTATGGGG TCTTGGCTAC GTGTTTGTCC CGGACGGCAG TAAGGCATGA
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| Protein sequence | MQENYKILVV DDDMRLRALL ERYLTEQGFQ VRSVANAEQM DRLLTRESFH LMVLDLMLPG
EDGLSICRRL RSQSNPMPII MVTAKGEEVD RIVGLEIGAD DYIPKPFNPR ELLARIRAVL
RRQANELPGA PSQEEAIIAF GKFKLNLGTR EMFRDDEPMP LTSGEFAVLK ALVSHPREPL
SRDKLMNLAR GREYSAMERS IDVQISRLRR MVEEDPAHPR YIQTVWGLGY VFVPDGSKA
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