| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3854 |
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| Symbol | argD |
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| ID | 8134841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4335026 |
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| End bp | 4336252 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644867161 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_003019405 |
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| Protein GI | 253690215 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCAG AGCAGAAAGC AGTGACACGG GATACTCACG ATAAAGTGAT TTTGCCGGTT
TATGCACCCG CGAAGTTTGT ACCAGTGAAA GGTAAAGGGA GTCGCGTCTG GGATCAGGAC
GGCCGTGAGT ATATCGATTT CTCCGGTGGC ATTGCGGTTA CGGCACTGGG CCACTGCCAT
CCTGCACTGG TTAATGCATT GCAGCAGCAG GGCGAAAAGC TGTGGCACAC TAGCAATATT
TTCACCAACG AACCTGCGCT ACGCCTCGCC AGCAAATTGA TTGATGCCAC TTTTGCCGAT
CGCGTGTTCT TTGTTAACTC CGGTGCGGAG GCTAACGAAG CCGCATTTAA GCTGGCGCGT
CACTATGCGG TTAAACGCCA TAGTCCGTAT AAAACCAAGA TTATCGCCTT CTACAATGCG
TTTCATGGCC GTACGCTGTT TACCGTTTCG GTTGGCGGAC AGCCTAAATA TGCCGATGGT
TTCGGACCTA AGCCTGCGGA TATTGTCCAT GTTCCTTTCA ACGATCTGGC TGCGGTTAAA
GCGGTGATGG ACGATCACAC CTGCGCAGTC GTACTGGAGC CGATTCAGGG TGAGGGCGGT
ATTACGCCTG CTACGCCTGA GTTCTTGCAA GGCGTTCGCG ATCTATGCGA TCAGCACAAG
GCGCTGCTGG TATTTGATGA AGTGCAGAGT GGGATGGGGC GTACCGGTAA ACTATTCAGC
TACATGCACT ACGGCATTAC GCCGGATATT CTCACCACCG CTAAAGCGTT GGGCGGTGGA
TTCCCGATTA GCGCGATGTT GACGACGGAA GAAATCGCTT CTGTGATGAC AGTTGGGGTA
CACGGCACCA CTTATGGCGG CAACCCGCTG GCCTGTGCGG TGGCTGAAGC CGCGCTGGAT
ATTATTAACA CGCCGGAAGT GCTGTCAGGC GTGGCGGATC GGCACGATCG CTTTGTCAGT
GAACTTGAGA AAATCAATCA GCAGTATGGC GTATTCGAGC AGATTCGCGG TATGGGGCTC
CTGCTGGGGG CGGAATTGAA ACCGCAGTGG CATGGTCGCG CGGGCGAGTT TCTGGCGGCG
GCAACGGCTC AGGGCCTGAT GGTACTGATG GCAGGGCCGA ACGTCATCCG CTTTGTGCCG
TCTTTGATCA TTGATGAAGA CGATATTGTG CAGGGGATGG CGAAGTTCGC TAACGCTGTT
GCACAGGTCG TTAACGTAGC AAACTGA
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| Protein sequence | MAAEQKAVTR DTHDKVILPV YAPAKFVPVK GKGSRVWDQD GREYIDFSGG IAVTALGHCH
PALVNALQQQ GEKLWHTSNI FTNEPALRLA SKLIDATFAD RVFFVNSGAE ANEAAFKLAR
HYAVKRHSPY KTKIIAFYNA FHGRTLFTVS VGGQPKYADG FGPKPADIVH VPFNDLAAVK
AVMDDHTCAV VLEPIQGEGG ITPATPEFLQ GVRDLCDQHK ALLVFDEVQS GMGRTGKLFS
YMHYGITPDI LTTAKALGGG FPISAMLTTE EIASVMTVGV HGTTYGGNPL ACAVAEAALD
IINTPEVLSG VADRHDRFVS ELEKINQQYG VFEQIRGMGL LLGAELKPQW HGRAGEFLAA
ATAQGLMVLM AGPNVIRFVP SLIIDEDDIV QGMAKFANAV AQVVNVAN
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