Gene PC1_3853 details

Gene Information

• Locus tag: PC1_3853
• ID: 8134840
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 4334276
• End bp: 4334908
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644867160
• Product: cAMP-regulatory protein
• Protein accession: YP_003019404
• Protein GI: 253690214
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTCTCG GCAAACCGCA GACAGACCCA ACTCTCGAAT GGTTCCTTTC CCATTGTCAT 
ATCCACAAGT ATCCATCGAA GAGCACGCTT ATTCACCAAG GTGAAAAAGC AGAAACGCTT 
TACTACATCG TGAAAGGCTC TGTCGCAGTG CTAATCAAAG ATGAAGAAGG CAAGGAAATG 
ATTCTTTCCT ACCTCAATCA GGGCGATTTT ATCGGCGAGC TCGGCCTGTT TGAAGAAGGT 
CAGGAGCGCA GCGCTTGGGT GCGGGCAAAA ACCGCCTGTG AAGTGGCTGA AATTTCCTAT 
AAAAAATTCC GCCAGCTCAT CCAGGTTAAC CCTGATATTC TCATGCGTCT GTCTGCGCAA 
ATGGCCAGCA GACTCCAGGT TACCTCAGAG AAAGTCGGCA ACCTCGCCTT CCTTGATGTG 
ACCGGCCGTA TTGCCCAAAC CCTACTCAAC CTGGCCAAAC AACCTGATGC CATGACGCAT 
CCAGATGGCA TGCAAATAAA AATTACCCGT CAGGAAATTG GGCAAATCGT TGGCTGCTCG 
CGCGAAACCG TGGGCCGCAT TCTGAAAATG TTAGAAGACC AGAACCTGAT CTCTGCGCAC 
GGTAAAACGA TTGTCGTTTA CGGCACTCGC TAA 

 

Protein sequence

MVLGKPQTDP TLEWFLSHCH IHKYPSKSTL IHQGEKAETL YYIVKGSVAV LIKDEEGKEM 
ILSYLNQGDF IGELGLFEEG QERSAWVRAK TACEVAEISY KKFRQLIQVN PDILMRLSAQ 
MASRLQVTSE KVGNLAFLDV TGRIAQTLLN LAKQPDAMTH PDGMQIKITR QEIGQIVGCS 
RETVGRILKM LEDQNLISAH GKTIVVYGTR