Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3849 |
Symbol | |
ID | 8134836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4331144 |
End bp | 4332148 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644867156 |
Product | putative hydrolase |
Protein accession | YP_003019400 |
Protein GI | 253690210 |
COG category | [R] General function prediction only |
COG ID | [COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGACC ATTTTCATCC GCTGAGCGGC GCGCATAACC CGCATCTGCA AACGCTATTG CCGCGTCTGA TTCGCCGTCA CGCGCAGTTT TCGCCAGTCT GGCAGCCCCT TGAGTTACCG GACGGCGATT TCGTCGATCT GGCGTGGAGC GAAGCGCCCG AACAGGCGCG GAACAAACCG CGCGTGGTGC TGTTCCACGG GCTGGAAGGC AGCTTTCATA GCCCCTACGC CCACGGCCTG CTGCATGCCT GTAAACAGCG CGGCTGGCTG GCCGTCGTCA TGCATTTTCG TGGGTGCAGC GGAAAACCCA ACCGGATGAA GCGTATTTAT CACTCCGGCG AAACCAGCGA TGCCAGCTAT TTCCTGCGCT GGATGCAAGA GACGCTGGGC GATGCGCCTA CCGCCGCCAT CGGCGTGTCC CTCGGTGGCA ATATGCTGGC CTATCTGCTC GCGCAGCAAG GCGAATCCTG TTATCTCTCT GCTGCCGTCA TTGTTTCCGC GCCATTGATG CTCGAACCCT GTAGCCGTCG CATGGAGCAA GGCTTCTCCC GCGTCTATCA GCACTACCTG CTGCGACTGC TAAAGCAAAA TGCCGGCCGC AAGCTGGCAG CCTACCCGGA CACGCTGCCG ATTCAGTTGC CGCAACTGAA ACGCATCCGC CAGTTACGAG AGTTTGATGA CGTCATTACG TCACGTATTC ACGGCTTCCA CGATGCCGCC GACTACTATC GACGCTGTAG CGCCCTGCCG CTGTTGCCTC AGATTCGCAC ACCGCTGCTC ATCATCCATG CGAAGGACGA TCCTTTCATG ACGTCAGAGG TGATTCCCGA TCTGTCGCAG TTACCGTCTA ATATTGAATA TCAGCTAACA GAACACGGCG GGCATGTTGG TTTCGTCGGT GGAACGCTGC TGAAACCGAA AATGTGGCTG GAACAGCGCA TTCCCAACTG GCTTAGCCCA TTTTTGGACC ACGCCACCGA CTCCCCTTTG ACTCAGGAAC CATAG
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Protein sequence | MYDHFHPLSG AHNPHLQTLL PRLIRRHAQF SPVWQPLELP DGDFVDLAWS EAPEQARNKP RVVLFHGLEG SFHSPYAHGL LHACKQRGWL AVVMHFRGCS GKPNRMKRIY HSGETSDASY FLRWMQETLG DAPTAAIGVS LGGNMLAYLL AQQGESCYLS AAVIVSAPLM LEPCSRRMEQ GFSRVYQHYL LRLLKQNAGR KLAAYPDTLP IQLPQLKRIR QLREFDDVIT SRIHGFHDAA DYYRRCSALP LLPQIRTPLL IIHAKDDPFM TSEVIPDLSQ LPSNIEYQLT EHGGHVGFVG GTLLKPKMWL EQRIPNWLSP FLDHATDSPL TQEP
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