| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3839 |
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| Symbol | |
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| ID | 8134826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4320973 |
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| End bp | 4321815 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644867146 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_003019390 |
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| Protein GI | 253690200 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTCT CTTCCGATAC ACCCACTCGC CACGACAGGC ATGGTCGCTA TCCCGAAGCC
GCCACGGTTG AAGATTTCCA GATCAATCTG GCGGCGGTGC AGGCCCGCAT TGAAGCGGCA
TGCCGCCGCG TCGATCGCGA TCCCGCGACG GTACGACTGC TGCCAGTCAG CAAGACCAAG
CCTGAAAGCC GCCTGCGTAT GGCTCATATG GCAGGTTGTC GGGTATTGGG CGAGAACAAA
GTGCAGGAGG CGTACCGTAA ATGGGAATCG ATGCAGGACT TAGCCGACTT GCAGTGGTCG
GTCATTGGGC ACCTGCAAAC CAACAAGGCG AAGCTAGTGG CACGCTTCGC TACCGAATTT
CAGGCGCTGG ACAGCCTGCG GCTGGCTGAA GCGCTGGATC GCCGATTACA GGTAGAAGGG
CGCTCATTAG ACGTATTCGT ACAGGTGAAT ACCTCCGGTG AGGCCAGTAA ATACGGCCTG
TCTCCCGATG ACGTACCGGC TTTTATTCAG GCACTTCCCA CATTCTCTGC GCTACGTGTG
CGTGGGCTCA TGACGCTGGC GCTGTTCTCC AGCGAGGCCG AACGTGTGCG CCAGTGTTTT
GTACGGTTGC GTCAGCTGCG CGAGCGATTG CAGCAAAATC TCCCGACAGG CATCGATCTG
GATGAATTAT CCATGGGGAT GTCCGGCGAT TTTGAAATAG CTATTGAGGA AGGCGCGACC
GTGGTGCGCG TCGGTCAGGC AATCTTTGGC GCCCGTCCGC TACCGGATAG CTACTACTGG
CCTGACGAAC CTCTCACACA ATCACACAAT CACACGATTA AAAAACCAAT GACTAACGCA
TAG
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| Protein sequence | MPLSSDTPTR HDRHGRYPEA ATVEDFQINL AAVQARIEAA CRRVDRDPAT VRLLPVSKTK
PESRLRMAHM AGCRVLGENK VQEAYRKWES MQDLADLQWS VIGHLQTNKA KLVARFATEF
QALDSLRLAE ALDRRLQVEG RSLDVFVQVN TSGEASKYGL SPDDVPAFIQ ALPTFSALRV
RGLMTLALFS SEAERVRQCF VRLRQLRERL QQNLPTGIDL DELSMGMSGD FEIAIEEGAT
VVRVGQAIFG ARPLPDSYYW PDEPLTQSHN HTIKKPMTNA
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