Gene PC1_3834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3834 
Symbol 
ID8134821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4315179 
End bp4315925 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content48% 
IMG OID644867141 
ProductYheO domain protein 
Protein accessionYP_003019385 
Protein GI253690195 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.249663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCTGA GGGTGGTGTC TGCCATGTCT AATTCGCTTG TATCTGGCGA ATCTTATGAG 
CTTGATTTGC TGGATGAACG TCCTTTCAGC CAAACGGACT ATGAGATCCT GAAATCGTAT
GAAGCGGTGG TTGATGGCTT GGCCATGTTG ATTGGCGAGC ACTGTGAGAT TGTGTTGCAC
TCGCTCGAGG ATCTTAAATG TTCCGCCGTG CGTATTGCGA ATGGAGAACA TACTGGCAGG
AAGATTGGCT CGCCGATTAC GGATCTTGCA TTGCGCATGC TGCATGACAT GGCAGGTGAG
GATAGCAGCG TATCGAAAGC GTATTTTACC CGCGCAAAAA GCGGTGTGTT GATGAAGTCC
GTCACAATTG CGATTCGTAA TCGCGATCAG CGCGTGATTG GGCTGCTATG CATCAACATG
AATCTGGACG TCCCTTTCTC CCAGATCGTA CAGACCTTTA TTCCACCTGA AACGCATGAT
GCCGCATCTT CTGTTAACTT TGCGTCGTCG GTTGACGACC TCGTGGCACA AACGCTGGAA
TTTTCGATCG AAGAAGTCAA TGCGGATCGC AACGTCTCCA ATAATGCGAA AAATCGTCAA
ATCGTACTGA GCCTGTACGA GAAAGGTATC TTTGATATTA AAGACGCCAT CAACCAGGTC
GCCGAACGTC TCAATATTTC CAAACACACG GTCTACCTTT ATATCCGTCA ATTCAAAAGC
GGCGACTTCA GCGGACATGA ACGCTGA
 
Protein sequence
MMLRVVSAMS NSLVSGESYE LDLLDERPFS QTDYEILKSY EAVVDGLAML IGEHCEIVLH 
SLEDLKCSAV RIANGEHTGR KIGSPITDLA LRMLHDMAGE DSSVSKAYFT RAKSGVLMKS
VTIAIRNRDQ RVIGLLCINM NLDVPFSQIV QTFIPPETHD AASSVNFASS VDDLVAQTLE
FSIEEVNADR NVSNNAKNRQ IVLSLYEKGI FDIKDAINQV AERLNISKHT VYLYIRQFKS
GDFSGHER