| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3830 |
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| Symbol | rpsL |
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| ID | 8134817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4313610 |
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| End bp | 4313984 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644867137 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_003019381 |
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| Protein GI | 253690191 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000656344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACAA TTAACCAGCT GGTACGCAAA CCACGCTCCC TGAAGGCTGC TAAAAGCAAC
GTTCCGGCGC TGGAAGCATG CCCGCAGAAA CGTGGCGTAT GTACTCGTGT ATATACTACC
ACCCCTAAAA AACCGAACTC CGCACTGCGT AAAGTATGCC GTGTTCGTTT AACTAACGGT
TTTGAAGTTA CCTCCTATAT CGGTGGTGAA GGTCATAACC TGCAGGAGCA CTCCGTGATC
CTGATCCGTG GCGGTCGTGT TAAAGACCTG CCAGGTGTGC GTTACCACAC CGTTCGTGGC
GCGCTGGACT GCTCAGGTGT TAAAGACCGT AAGCAATCCC GTTCCAAATA CGGCGTGAAG
AAGCCAAAGG CTTAA
|
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| Protein sequence | MATINQLVRK PRSLKAAKSN VPALEACPQK RGVCTRVYTT TPKKPNSALR KVCRVRLTNG
FEVTSYIGGE GHNLQEHSVI LIRGGRVKDL PGVRYHTVRG ALDCSGVKDR KQSRSKYGVK
KPKA
|
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