Gene PC1_3815 details

Gene Information

• Locus tag: PC1_3815
• Symbol: rplP
• ID: 8134802
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: -
• Start bp: 4303815
• End bp: 4304225
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 644867122
• Product: 50S ribosomal protein L16
• Protein accession: YP_003019366
• Protein GI: 253690176
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000419502
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTACAAC CAAAGCGTAC AAAATTCCGT AAGGTGCACA AGGGCCGCAA CCGTGGTCTG 
GCGCAGGGTA CGGATGTTAG CTTCGGCACT TTCGGTCTGA AAGCTGTTGG CCGCGGTCGC 
CTGACTGCTC GTCAAATCGA AGCTGCACGT CGTGCCATGA CTCGTGCTGT TAAGCGTCAA 
GGTAAGATCT GGATCCGTGT ATTCCCGGAC AAACCGATCA CCGAGAAACC GCTTGAAGTT 
CGTATGGGTA AAGGTAAAGG TAACGTGGAA TATTGGGTTG CCTTGATTCA GCCAGGTAAA 
GTCCTGTACG AAATGGACGG TGTGCCGGAA GAGTTAGCCC GTGAGGCATT CCAACTGGCA 
GCAGCGAAAC TGCCTATCAA AACCACCTTT GTAACTAAGA CGGTGATGTA A 

 

Protein sequence

MLQPKRTKFR KVHKGRNRGL AQGTDVSFGT FGLKAVGRGR LTARQIEAAR RAMTRAVKRQ 
GKIWIRVFPD KPITEKPLEV RMGKGKGNVE YWVALIQPGK VLYEMDGVPE ELAREAFQLA 
AAKLPIKTTF VTKTVM