| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3808 |
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| Symbol | rpsH |
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| ID | 8134795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4301211 |
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| End bp | 4301603 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644867115 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_003019359 |
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| Protein GI | 253690169 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000417355 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATGC AAGATCCGAT CGCGGATATG CTGACCCGTA TCCGTAACGG TCAAGCCGCG
AACAAAGTTG CGGTCACCAT GCCTTCCTCC AAGCTGAAAG TGGCAATTGC CAACGTGCTG
AAGGAAGAAG GTTACATTGA AGATTTCAAA ATCGAAGGCG ACACCAAGCC AGTTCTGGAA
TTAGAACTTA AATATTTCCA GGGCAAGGCA GTGGTAGAAA GCATTCAGCG AGTAAGCCGT
CCAGGTCTGC GCATCTATAA AAGAAAAGAT GAGCTGCCAA AAGTTATGGC CGGTTTGGGT
ATCGCAGTTG TTTCTACCTC TAAAGGTGTT ATGACTGATC GTGCAGCTCG CCAAGCTGGT
CTTGGTGGCG AGATTATCTG CTACGTAGCT TAA
|
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| Protein sequence | MSMQDPIADM LTRIRNGQAA NKVAVTMPSS KLKVAIANVL KEEGYIEDFK IEGDTKPVLE
LELKYFQGKA VVESIQRVSR PGLRIYKRKD ELPKVMAGLG IAVVSTSKGV MTDRAARQAG
LGGEIICYVA
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