| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3802 |
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| Symbol | secY |
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| ID | 8134789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4297825 |
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| End bp | 4299156 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644867109 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_003019353 |
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| Protein GI | 253690163 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0290035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCAAAC AACCAGGATT AGATTTTCAG AGTGCTAAAG GCGGAGTTGG TGAACTGAAG
CGCAGACTTT TGTTTGTTAT CGGTGCGCTA ATTGTTTTCC GTATTGGCTC TTTTATTCCG
ATTCCTGGTA TTGATGCCAC TGTGCTTGCC AAATTGCTTG AACAGCAGCG AGGCACCATC
ATTGAAATGT TTAACATGTT CTCTGGTGGT GCTCTCAGCC GTGCTTCTAT CTTTGCCCTG
GGTATTATGC CGTATATTTC GGCATCTATT ATTATCCAGT TGCTGACGGT GGTTCATCCT
GCGTTGGCTG AAATAAAGAA AGAAGGGGAA GCTGGCCGTC GTAAGATCAG CCAGTATACC
CGCTACGGTA CCTTGGTATT GGCTATATTC CAGTCGATCG GTATTGCTAC TGGTCTGCCG
AATATGCCTG GAATGCAAGA CTTGGTGATA AATCCAGGTT TTGCTTTCTA CTTTACCGCT
GTTGTGAGTC TGGTCACTGG GACAATGTTC CTGATGTGGC TGGGAGAACA GATTACGGAA
CGTGGTATCG GCAACGGTAT CTCGATCATA ATCTTTGCTG GTATTGTTGC GGGTCTACCG
CCGGCCATTG GCCATACCAT CGAGCAAGCT CGGCAAGGCG ACCTGCACTT CCTCCTGTTG
CTGTTGGTTG CAGTTTTAGT GTTTGCAGTA ACCTTCTTCG TTGTTTTCAT TGAGCGTGGT
CAACGTCGTA TCGTCGTTAA TTATGCAAAA CGTCAACAAG GTCGTCGTGT TTATGCAGCA
CAGAGTACGC ATTTACCGCT GAAGGTGAAT ATGGCTGGGG TTATTCCCGC GATCTTCGCT
TCCAGTATTA TTCTGTTCCC TGCCACGATT GCATCTTGGT TTGGGGGCGG TACCGGTTGG
AACTGGCTGA CAACTATTTC GCTGTATTTG CAGCCCGGAC AACCGCTTTA TGTGTTACTC
TATGCGTCTG CAATCATCTT CTTCTGTTTC TTCTACACTG CGTTGGTTTT CAACCCGCGT
GAAACAGCAG ATAACCTGAA GAAGTCCGGT GCATTCGTGC CAGGAATTCG TCCGGGAGAG
CAAACGGCGA AATATATCGA TAAAGTGATG ACTCGCCTAA CTCTGATTGG TGCGATGTAT
ATTACTTTTA TCTGCCTGAT CCCGGAGTTT ATGCGTGACG CAATGAAAGT ACCTTTCTAT
TTCGGGGGTA CATCTTTATT GATCGTTGTT GTCGTCATCA TGGACTTTAT GGCTCAAGTG
CAAACTCTGA TGATGTCGAG TCAATATGAG TCTGCATTGA AGAAAGCAAA CCTGAAAGGC
TATAACCGTT AA
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| Protein sequence | MAKQPGLDFQ SAKGGVGELK RRLLFVIGAL IVFRIGSFIP IPGIDATVLA KLLEQQRGTI
IEMFNMFSGG ALSRASIFAL GIMPYISASI IIQLLTVVHP ALAEIKKEGE AGRRKISQYT
RYGTLVLAIF QSIGIATGLP NMPGMQDLVI NPGFAFYFTA VVSLVTGTMF LMWLGEQITE
RGIGNGISII IFAGIVAGLP PAIGHTIEQA RQGDLHFLLL LLVAVLVFAV TFFVVFIERG
QRRIVVNYAK RQQGRRVYAA QSTHLPLKVN MAGVIPAIFA SSIILFPATI ASWFGGGTGW
NWLTTISLYL QPGQPLYVLL YASAIIFFCF FYTALVFNPR ETADNLKKSG AFVPGIRPGE
QTAKYIDKVM TRLTLIGAMY ITFICLIPEF MRDAMKVPFY FGGTSLLIVV VVIMDFMAQV
QTLMMSSQYE SALKKANLKG YNR
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