| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3801 |
|---|
| Symbol | rpmJ |
|---|
| ID | 8134788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 4297675 |
|---|
| End bp | 4297791 |
|---|
| Gene Length | 117 bp |
|---|
| Protein Length | 38 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644867108 |
|---|
| Product | 50S ribosomal protein L36 |
|---|
| Protein accession | YP_003019352 |
|---|
| Protein GI | 253690162 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0257] Ribosomal protein L36 |
|---|
| TIGRFAM ID | [TIGR01022] ribosomal protein L36, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0207121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTC GTGCTTCCGT CAAGAAATTA TGTCGTAACT GTAAGATTGT TAAGCGTAAC
GGTGTCGTTC GTGTGATCTG CAGTGCCGAA CCGAAGCATA AACAGCGTCA AGGCTGA
|
|---|
| Protein sequence | MKVRASVKKL CRNCKIVKRN GVVRVICSAE PKHKQRQG
|
|---|
| |