Gene PC1_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3793 
SymbolmscL 
ID8134780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4293443 
End bp4293856 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content45% 
IMG OID644867100 
Productlarge-conductance mechanosensitive channel 
Protein accessionYP_003019344 
Protein GI253690154 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.832034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCA TCAAAGAATT TAGAGAGTTT GCCATGCGTG GCAATGTTGT CGATTTAGCG 
GTGGGTGTCA TTATTGGTGC TGCTTTCGGC AAAATTGTCT CTTCACTGGT ATCAGATATT
ATTATGCCGC CGCTTGGGCT TTTGATTGGC GGGGTCGATT TTAAACAATT CAGCCTTATT
CTGCGTGATG CCCAAGGCGA AGTTCCCGCC GTTGTCATGA ACTATGGCGC TTTCATTCAA
AATATTTTCG ACTTTGTCAT CGTTGCTTTC GCGATCTTTA TGGCAATTAA GCTCATGAAC
AAGCTGCGTC GCAAACAGGA AGATGAGCCT GCCGCACCGC CTAAACCTAG TGCTGAAGAG
AAGCTGCTAG CTGAGATTCG AGATTTGCTG AAAGAACAAC AGCCTAAACA GTAA
 
Protein sequence
MSIIKEFREF AMRGNVVDLA VGVIIGAAFG KIVSSLVSDI IMPPLGLLIG GVDFKQFSLI 
LRDAQGEVPA VVMNYGAFIQ NIFDFVIVAF AIFMAIKLMN KLRRKQEDEP AAPPKPSAEE
KLLAEIRDLL KEQQPKQ