Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3793 |
Symbol | mscL |
ID | 8134780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4293443 |
End bp | 4293856 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644867100 |
Product | large-conductance mechanosensitive channel |
Protein accession | YP_003019344 |
Protein GI | 253690154 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.832034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCATCA TCAAAGAATT TAGAGAGTTT GCCATGCGTG GCAATGTTGT CGATTTAGCG GTGGGTGTCA TTATTGGTGC TGCTTTCGGC AAAATTGTCT CTTCACTGGT ATCAGATATT ATTATGCCGC CGCTTGGGCT TTTGATTGGC GGGGTCGATT TTAAACAATT CAGCCTTATT CTGCGTGATG CCCAAGGCGA AGTTCCCGCC GTTGTCATGA ACTATGGCGC TTTCATTCAA AATATTTTCG ACTTTGTCAT CGTTGCTTTC GCGATCTTTA TGGCAATTAA GCTCATGAAC AAGCTGCGTC GCAAACAGGA AGATGAGCCT GCCGCACCGC CTAAACCTAG TGCTGAAGAG AAGCTGCTAG CTGAGATTCG AGATTTGCTG AAAGAACAAC AGCCTAAACA GTAA
|
Protein sequence | MSIIKEFREF AMRGNVVDLA VGVIIGAAFG KIVSSLVSDI IMPPLGLLIG GVDFKQFSLI LRDAQGEVPA VVMNYGAFIQ NIFDFVIVAF AIFMAIKLMN KLRRKQEDEP AAPPKPSAEE KLLAEIRDLL KEQQPKQ
|
| |